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SCNpilot_expt_1000_bf_scaffold_7575_curated_1

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: 687..1853

Top 3 Functional Annotations

Value Algorithm Source
Penicillin-binding protein 1A n=1 Tax=Shinella zoogloeoides DD12 RepID=V5EUS6_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 91.6
  • Coverage: 392.0
  • Bit_score: 727
  • Evalue 1.00e-206
  • rbh
Penicillin-binding protein 1A {ECO:0000313|EMBL:EYR82293.1}; EC=2.4.2.- {ECO:0000313|EMBL:EYR82293.1};; EC=3.4.-.- {ECO:0000313|EMBL:EYR82293.1};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 91.6
  • Coverage: 392.0
  • Bit_score: 727
  • Evalue 1.40e-206
penicillin-binding protein 1A family; K05366 penicillin-binding protein 1A [EC:2.4.1.- 3.4.-.-] similarity KEGG
DB: KEGG
  • Identity: 85.2
  • Coverage: 392.0
  • Bit_score: 677
  • Evalue 2.90e-192
  • rbh

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1167
ATGGAAGGCGGCACCTACCGGCTGCGCCAGCCGCCGAAGGTGCAGGGCGGTCTCGTCGCCATGGACCCGCATACCGGCCGCGTGCTCGCCATGGTCGGCGGCTTCTCCTACGGCCAGTCCGAATTCAACCGCGCCACGCAGGCGATGCGCCAGCCGGGCTCGTCCTTCAAGCCCTTCGTCTATGCCGCGGCCCTCGACAACGGCTATACGCCCGCCTCGGTGATCCTGGACGCGCCGATCGAGATCGTCGCCGGCGGCCAGGTCTGGCGCCCGCAGAACTACGGCGGCGGCTCGGCCGGCCCCTCGACGCTGCGCCTCGGCATCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNACCTCGTCGCCGAATATGCCGAGCGCTTCGGCATCTACGACAAGATGCTGCCCGTTCTCGCCATGTCGCTCGGCTCCGGCGAGACGACCGTGCTGCGCATGGTCTCGGCCTATGCGGTGCTCGCCAATGGCGGCAAGCAGATCAAGCCGTCGCTGATCGACCGCATCCAGGACCGCTACGGCAAGACGATCTTCCGCCACGAGGAGCGCACCTGCGAGAACTGCAACGCCGGCGACTGGGAAAACCAGGAGGAGCCGACGCTGGTAGACAACCGCGAGCAGGTGCTCGACCCGATGACCGCCTACCAGATCACCTCCATGATGGAAGGCGTCGTCACCCGCGGCACCGCCGCCGGCAAGATCAAGCTCGACCGCCCGACGGCCGGCAAGACCGGCACCACGAATGACGAGAAGGACGCCTGGTTCGTCGGCTATACGCCCGATCTCGTCGCCGGCCTCTATATCGGTTTCGACAACCCGGCTCCGCTCGGCCGCGGCGCGACCGGCGGCTCGCTCTCCGCGCCGATCTTCAACGAATTCATGCAGGCCGCCCTCGAAGGCACGCGCCCGACGAAGTTCATCGTGCCCGAGGGCATGAAGTTCATCGCCGTCAACCGCAAGACCGGCATGCAGGCCTATGAAGGCGACCCGGACACGATCATGGAAGCCTTCAAGCCCGGCACCGGCCCGGCCGACGTCTTCTCCGTCATCGGCGGCGACGAATATGCCACGCCCGAGGAGATCCTGAAGAGCTCGCCGCAGGCCAACCAGGCGGTGACGGGCGGCAGCGGCGGCCTGTTCTGA
PROTEIN sequence
Length: 389
MEGGTYRLRQPPKVQGGLVAMDPHTGRVLAMVGGFSYGQSEFNRATQAMRQPGSSFKPFVYAAALDNGYTPASVILDAPIEIVAGGQVWRPQNYGGGSAGPSTLRLGIXXXXXXXXXXXXXXLVAEYAERFGIYDKMLPVLAMSLGSGETTVLRMVSAYAVLANGGKQIKPSLIDRIQDRYGKTIFRHEERTCENCNAGDWENQEEPTLVDNREQVLDPMTAYQITSMMEGVVTRGTAAGKIKLDRPTAGKTGTTNDEKDAWFVGYTPDLVAGLYIGFDNPAPLGRGATGGSLSAPIFNEFMQAALEGTRPTKFIVPEGMKFIAVNRKTGMQAYEGDPDTIMEAFKPGTGPADVFSVIGGDEYATPEEILKSSPQANQAVTGGSGGLF*