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SCNpilot_expt_1000_bf_scaffold_7575_curated_3

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: 2822..3091

Top 3 Functional Annotations

Value Algorithm Source
Peptide chain release factor 2 n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CD72_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 95.5
  • Coverage: 89.0
  • Bit_score: 172
  • Evalue 1.70e-40
Peptide chain release factor 2 {ECO:0000256|HAMAP-Rule:MF_00094, ECO:0000256|SAAS:SAAS00020438}; Short=RF-2 {ECO:0000256|HAMAP-Rule:MF_00094};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 95.5
  • Coverage: 89.0
  • Bit_score: 172
  • Evalue 2.40e-40
prfB; Peptide chain release factor 1 RF-1; K02836 peptide chain release factor 2 similarity KEGG
DB: KEGG
  • Identity: 93.3
  • Coverage: 89.0
  • Bit_score: 169
  • Evalue 4.50e-40

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 270
ATGCTGCGTGCCCGCCTCTACGAGGCGGAGCTGAAGAAGCGCGAGGAGGCCGCCAACGCCGAATCCGCCTCCAAGACGGACATCGGCTGGGGTCACCAGATCCGTTCCTACGTCCTGCAGCCCTACCAGCTCGTCAAGGACCTGCGCACCGGCGTCGAAAGCTCGGCCCCGTCGGATGTCCTCGACGGCGAGCTCAACGAGTTCATGGAAGCCGCGCTCGCGCATCGCGTCAACGGCGGCGCGGATGCGGTCGTCGACGACCTGAACTGA
PROTEIN sequence
Length: 90
MLRARLYEAELKKREEAANAESASKTDIGWGHQIRSYVLQPYQLVKDLRTGVESSAPSDVLDGELNEFMEAALAHRVNGGADAVVDDLN*