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SCNpilot_expt_1000_bf_scaffold_7575_curated_13

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: comp(8453..9382)

Top 3 Functional Annotations

Value Algorithm Source
23S rRNA (Guanosine-2'-O-)-methyltransferase RlmB n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CT38_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 93.5
  • Coverage: 291.0
  • Bit_score: 539
  • Evalue 2.40e-150
  • rbh
23S rRNA (Guanosine-2'-O-)-methyltransferase RlmB {ECO:0000313|EMBL:EYR82300.1}; EC=2.1.1.185 {ECO:0000313|EMBL:EYR82300.1};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 93.5
  • Coverage: 291.0
  • Bit_score: 539
  • Evalue 3.30e-150
rRNA methylase (EC:2.1.1.-) similarity KEGG
DB: KEGG
  • Identity: 78.7
  • Coverage: 291.0
  • Bit_score: 463
  • Evalue 3.90e-128
  • rbh

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 930
ATGCGCCGTGCAAAACGCTGCACACTTTTGCGCGACATGCTTTATAGAGGCCACATGAGCAAGGACGATACCGGCGGCAAGTCCGCAAAAGACACCCACTATGCCAAACTCCGCCGGGCGCACCGCGACCAGCGGCGCGAGCGCGGCGAGATCCCGACACCCAAGGACGACCGCCGCCGCAAGCAGGCGGAGGGCTGGAAGGCGCCGGCCGTCGCGCCCGACCAGGTCTATCTCTACGGCCTGCACACGGTGCGCGCGGCGCTCGACAATCCCGAGCGGCGGATCGTCAAGCTCTCCGTCAGCCAGAATGCCGCCCAGCGGCTGGAGCTGCCGGACCCTTCGACCCTGCCCTATCCGGTCGAGACCGTGCTTCCGTCCGATCTCGACAAGGTGCTGGGGCCGGAGGCGATCCACCAGGGCGTGATGCTGGAAACGCGCCCGCTGCCGGTGCGGCGCCTCGAGGCGCTGAAGGACTCGCGCCTGCTCCTCGTCCTCGACCAGGTCACCGACCCGCACAATGTGGGCGCCATCATGCGCTCGGCCGTCGCCTTCAACGCCGGCGCCGTCATCACCACGCAGCGCCACTCGCCAACCGAATCGGGCGTGCTGGCCAAGACCGCCTCCGGCGCGCTGGAGCTCATTCCCTATATCCAGATCACCAACCTGTCGGACGCGCTGGAGGAGTTGCACAAGCTCGGCTTCCTGACGGTCGGCCTGGATTCGGAAGGCCCGGCGCCGCTGGAAGGCACGCTTTCCGGCCAGCGCATCGCGCTCGTCATGGGCTCGGAGGGCAAGGGGCTGCGGCAGAAGACGCGCGCCACCTGCAAGGCGCTCGCCCGTCTCGACATGCCCGGCGCAATCAAGTCGCTCAACGTTTCGAACGCCGCCGCCATCGCGCTCTATGCAACGCATCGGCACCTGTTCGGCTGA
PROTEIN sequence
Length: 310
MRRAKRCTLLRDMLYRGHMSKDDTGGKSAKDTHYAKLRRAHRDQRRERGEIPTPKDDRRRKQAEGWKAPAVAPDQVYLYGLHTVRAALDNPERRIVKLSVSQNAAQRLELPDPSTLPYPVETVLPSDLDKVLGPEAIHQGVMLETRPLPVRRLEALKDSRLLLVLDQVTDPHNVGAIMRSAVAFNAGAVITTQRHSPTESGVLAKTASGALELIPYIQITNLSDALEELHKLGFLTVGLDSEGPAPLEGTLSGQRIALVMGSEGKGLRQKTRATCKALARLDMPGAIKSLNVSNAAAIALYATHRHLFG*