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SCNpilot_expt_1000_bf_scaffold_2707_curated_16

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: 12312..13142

Top 3 Functional Annotations

Value Algorithm Source
Inner-membrane translocator n=1 Tax=Rhizobium sp. CCGE 510 RepID=J5MCV3_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 92.7
  • Coverage: 274.0
  • Bit_score: 501
  • Evalue 4.90e-139
  • rbh
Inner-membrane translocator {ECO:0000313|EMBL:EJT01940.1}; TaxID=1132836 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CCGE 510.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 92.7
  • Coverage: 274.0
  • Bit_score: 501
  • Evalue 6.80e-139
putative permease component of ABC transporter; K01998 branched-chain amino acid transport system permease protein similarity KEGG
DB: KEGG
  • Identity: 70.9
  • Coverage: 275.0
  • Bit_score: 388
  • Evalue 1.90e-105
  • rbh

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Taxonomy

Rhizobium sp. CCGE 510 → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 831
ATGTTCGCCGGCGTCAGCCTGCTCGGCATGGATCCGATGGCGGCCATCGTGCTCGGCGGGCTCGCAGCGCTGGCGCTGGCGATACCCACGGCCTTCTTCGTCTTCCGCCTGCAGGGCGCCTATTTCGCCATCGGCACCTGGGTGATCGCCGAGATCGTGCGGCTTTCGCTCGCGCAGTGGAAGGCGCTGGGCGGGGGCACCGGCACCTCGCTGCCGTCGGGCGCGACGCGCGACATGGTCGGCGTGCGCCTCGTCGCGGACCTTCTCTGCGTGCGCGGCCCGCAGGCCACCGACATCGTCTGCTACTGGCTGGCGCTGCTTCTGGCCGTCGTGACGATCGGCTCGATCTACAAGCTGCTGCGCTCCAAGCAGGGCCTGGGGCTTGCCGCGGTGCGCGACAACCGCGAGGCGGCGCGCTCGGTCGGCGTCGATCCGCTCTGGACGAAGTCCTTCGTCTATCTGGTCGCGGCGCTGGCGACGGGCCTTGCCGGTGCGCTGATCTATGTGCAGAAGGCGCGCATCTCGCCCGACGCCGCCTTCTCCGTTCCGGACTGGACGGCCTATGTCATCTTCATCGTCGTCATCGGCGGCATCGGCACGATCGAGGGGCCGATCGTCGGCGTGATCGTGTTCTACATCCTGCAGAGCCTGCTGGCCGACTACGGTTCCTGGTATCTGCTGATCCTCGGCCTGATCGGCATCCTGATCATGCTGTTTGCGCCGCGCGGCCTGTGGGGCCTGTTCACCGACCGCACGGCGATCCAGCTCTTTCCCGTCCGCCGCATCCTGGCGGGCCAAGCGAAAACCAAAGACATCAGAGGGAGTGACTGA
PROTEIN sequence
Length: 277
MFAGVSLLGMDPMAAIVLGGLAALALAIPTAFFVFRLQGAYFAIGTWVIAEIVRLSLAQWKALGGGTGTSLPSGATRDMVGVRLVADLLCVRGPQATDIVCYWLALLLAVVTIGSIYKLLRSKQGLGLAAVRDNREAARSVGVDPLWTKSFVYLVAALATGLAGALIYVQKARISPDAAFSVPDWTAYVIFIVVIGGIGTIEGPIVGVIVFYILQSLLADYGSWYLLILGLIGILIMLFAPRGLWGLFTDRTAIQLFPVRRILAGQAKTKDIRGSD*