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SCNpilot_expt_1000_bf_scaffold_2707_curated

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_2707_curated_1
Rhizobium sp. CCGE 510, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1..792
DNA (792bp) protein (264aa)
Inner-membrane translocator n=1 Tax=Rhizobium sp. CCGE 510 RepID=J5PPR1_9RHIZ rbh
Inner-membrane translocator {ECO:0000313|EMBL:EJT01953.1}; TaxID=1132836 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CCGE 510.;"
inner-membrane translocator; K01997 branched-chain amino acid transport system permease protein rbh
SCNpilot_expt_1000_bf_scaffold_2707_curated_2
Rhizobium sp. CCGE 510, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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797..1840
DNA (1044bp) protein (348aa)
Inner-membrane translocator n=1 Tax=Rhizobium sp. CCGE 510 RepID=J4T6A5_9RHIZ rbh
Inner-membrane translocator {ECO:0000313|EMBL:EJT01952.1}; TaxID=1132836 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CCGE 510.;"
inner-membrane translocator rbh
SCNpilot_expt_1000_bf_scaffold_2707_curated_3
Rhizobium sp. CCGE 510, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1837..2850
DNA (1014bp) protein (338aa)
Alcohol dehydrogenase GroES domain-containing protein n=1 Tax=Rhizobium sp. CCGE 510 RepID=J6DGW2_9RHIZ rbh
Alcohol dehydrogenase GroES domain-containing protein {ECO:0000313|EMBL:EJT01951.1}; TaxID=1132836 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CCGE 510.;"
alcohol dehydrogenase GroES domain-containing protein rbh
SCNpilot_expt_1000_bf_scaffold_2707_curated_4
Rhizobium sp. CCGE 510, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2875..3654
DNA (780bp) protein (260aa)
Alpha/beta hydrolase fold protein n=1 Tax=Rhizobium sp. CCGE 510 RepID=J5MCW5_9RHIZ rbh
Alpha/beta hydrolase fold protein {ECO:0000313|EMBL:EJT01950.1}; TaxID=1132836 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CCGE 510.;"
alpha/beta hydrolase fold protein rbh
SCNpilot_expt_1000_bf_scaffold_2707_curated_5
Rhizobium sp. CCGE 510, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3713..4939
DNA (1227bp) protein (409aa)
Acyl-CoA dehydrogenase type 2 domain n=1 Tax=Rhizobium sp. CCGE 510 RepID=J6DJQ5_9RHIZ rbh
Acyl-CoA dehydrogenase type 2 domain {ECO:0000313|EMBL:EJT01949.1}; TaxID=1132836 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CCGE 510.;"
acyl-CoA dehydrogenase type 2 domain rbh
SCNpilot_expt_1000_bf_scaffold_2707_curated_6
Rhizobium sp. CCGE 510, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4936..5544
DNA (609bp) protein (203aa)
Flavin reductase domain-containing FMN-binding protein n=1 Tax=Rhizobium sp. CCGE 510 RepID=J5PPQ1_9RHIZ rbh
Flavin reductase domain-containing FMN-binding protein {ECO:0000313|EMBL:EJT01948.1}; TaxID=1132836 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CCGE 510.;"
flavin reductase domain-containing FMN-binding protein
SCNpilot_expt_1000_bf_scaffold_2707_curated_7
Rhizobium sp. CCGE 510, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5577..6452)
DNA (876bp) protein (292aa)
LysR family transcriptional regulator n=1 Tax=Rhizobium sp. CCGE 510 RepID=J4T6A2_9RHIZ rbh
LysR family transcriptional regulator {ECO:0000313|EMBL:EJT01947.1}; TaxID=1132836 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CCGE 510.;"
LysR family transcriptional regulator rbh
SCNpilot_expt_1000_bf_scaffold_2707_curated_8
Rhizobium sp. CCGE 510, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6608..7468
DNA (861bp) protein (287aa)
Putative dioxygenase n=1 Tax=Rhizobium sp. CCGE 510 RepID=J6DGW0_9RHIZ rbh
Putative dioxygenase {ECO:0000313|EMBL:EJT01946.1}; TaxID=1132836 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CCGE 510.;"
putative dioxygenase rbh
SCNpilot_expt_1000_bf_scaffold_2707_curated_9
Rhizobium sp. CCGE 510, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7465..8529
DNA (1065bp) protein (355aa)
Alcohol dehydrogenase n=1 Tax=Rhizobium sp. CCGE 510 RepID=J5MCV9_9RHIZ rbh
Alcohol dehydrogenase {ECO:0000313|EMBL:EJT01945.1}; TaxID=1132836 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CCGE 510.;"
tftE; alcohol dehydrogenase rbh
SCNpilot_expt_1000_bf_scaffold_2707_curated_10
unknown

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comp(8763..9047)
DNA (285bp) protein (95aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_2707_curated_11
unknown

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comp(9204..9356)
DNA (153bp) protein (51aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_2707_curated_12
Rhizobium sp. CCGE 510, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9543..9797
DNA (255bp) protein (85aa)
Putative substrate-binding component of ABC transporter n=1 Tax=Rhizobium sp. CCGE 510 RepID=J6DJQ1_9RHIZ
Putative substrate-binding component of ABC transporter {ECO:0000313|EMBL:EJT01944.1}; TaxID=1132836 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CCGE 510.;"
ABC transporter substrate-binding protein; K01999 branched-chain amino acid transport system substrate-binding protein
SCNpilot_expt_1000_bf_scaffold_2707_curated_13
Rhizobium sp. CCGE 510, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9801..10520
DNA (720bp) protein (240aa)
Putative ATP-binding ABC transporter component n=1 Tax=Rhizobium sp. CCGE 510 RepID=J5PPP3_9RHIZ rbh
Putative ATP-binding ABC transporter component {ECO:0000313|EMBL:EJT01943.1}; TaxID=1132836 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CCGE 510.;"
putative ATP-binding ABC transporter component; K01995 branched-chain amino acid transport system ATP-binding protein rbh
SCNpilot_expt_1000_bf_scaffold_2707_curated_14
Rhizobium sp. CCGE 510, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11735..12058
DNA (324bp) protein (108aa)
Inner-membrane translocator n=1 Tax=Rhizobium sp. CCGE 510 RepID=J6DGV6_9RHIZ
Inner-membrane translocator {ECO:0000313|EMBL:EJT01941.1}; TaxID=1132836 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CCGE 510.;"
inner-membrane translocator; K01997 branched-chain amino acid transport system permease protein
SCNpilot_expt_1000_bf_scaffold_2707_curated_15
Rhizobium sp. CCGE 510, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12060..12284
DNA (225bp) protein (75aa)
Inner-membrane translocator n=1 Tax=Rhizobium sp. CCGE 510 RepID=J5MCV3_9RHIZ
Inner-membrane translocator {ECO:0000313|EMBL:EJT01940.1}; TaxID=1132836 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CCGE 510.;"
inner-membrane translocator; K01998 branched-chain amino acid transport system permease protein
SCNpilot_expt_1000_bf_scaffold_2707_curated_16
Rhizobium sp. CCGE 510, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12312..13142
DNA (831bp) protein (277aa)
Inner-membrane translocator n=1 Tax=Rhizobium sp. CCGE 510 RepID=J5MCV3_9RHIZ rbh
Inner-membrane translocator {ECO:0000313|EMBL:EJT01940.1}; TaxID=1132836 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CCGE 510.;"
putative permease component of ABC transporter; K01998 branched-chain amino acid transport system permease protein rbh
SCNpilot_expt_1000_bf_scaffold_2707_curated_17
Rhizobium sp. CCGE 510, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13353..14435
DNA (1083bp) protein (361aa)
Putative dichlorophenol monooxygenase/hydroxylase n=1 Tax=Rhizobium sp. CCGE 510 RepID=J6DJP7_9RHIZ rbh
Putative dichlorophenol monooxygenase/hydroxylase {ECO:0000313|EMBL:EJT01939.1}; TaxID=1132836 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CCGE 510.;"
tfdB; 2,4-dichlorophenol 6-monooxygenase (EC:1.14.13.20); K10676 2,4-dichlorophenol 6-monooxygenase [EC:1.14.13.20] rbh
SCNpilot_expt_1000_bf_scaffold_2707_curated_18
Rhizobium sp. CCGE 510, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14641..14859
DNA (219bp) protein (73aa)
Putative dichlorophenol monooxygenase/hydroxylase n=1 Tax=Rhizobium sp. CCGE 510 RepID=J6DJP7_9RHIZ
Putative dichlorophenol monooxygenase/hydroxylase {ECO:0000313|EMBL:EJT01939.1}; TaxID=1132836 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CCGE 510.;"
monooxygenase FAD-binding; K10676 2,4-dichlorophenol 6-monooxygenase [EC:1.14.13.20]
SCNpilot_expt_1000_bf_scaffold_2707_curated_19
Agrobacterium albertimagni, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14867..14992
DNA (126bp) protein (42aa)
Putative dioxygenase n=1 Tax=Agrobacterium albertimagni AOL15 RepID=K2PJE7_9RHIZ
Putative dioxygenase {ECO:0000313|EMBL:EKF61033.1}; TaxID=1156935 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium albertimagni AOL15.;"
putative dioxygenase; K03381 catechol 1,2-dioxygenase [EC:1.13.11.1]
Displaying 19 items

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