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SCNpilot_expt_1000_bf_scaffold_40202_curated_5

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: comp(2278..3099)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI00037721C1 similarity UNIREF
DB: UNIREF100
  • Identity: 68.0
  • Coverage: 253.0
  • Bit_score: 345
  • Evalue 4.40e-92
  • rbh
Glutathione import ATP-binding protein GsiA {ECO:0000313|EMBL:EYR81116.1}; EC=3.6.3.- {ECO:0000313|EMBL:EYR81116.1};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 66.5
  • Coverage: 248.0
  • Bit_score: 341
  • Evalue 1.50e-90
oligopeptide/dipeptide ABC transporter ATPase; K02031 peptide/nickel transport system ATP-binding protein; K02032 peptide/nickel transport system ATP-binding protein similarity KEGG
DB: KEGG
  • Identity: 59.5
  • Coverage: 252.0
  • Bit_score: 308
  • Evalue 1.90e-81
  • rbh

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 822
GTGAACGGTGTCGATGTCGCCACCCTGCACGGCGATGCCCTGCTTTCGATGCGCCGCCGGTTCCAACTCCTCCTTCAGGACCCCTACAATTCCATCCCGTCGCATGTTTCCATCGGCACGACCATCGCCGAGCCGTTGCGCATCCACCGGCTCGCCTCCGGGAACGGATTGAGGGAGCGTGTTGGCGCCGTGATGCAGGAAGTCGGGCTCTCGCCCGACCTCTACGATGCCTTGCCTGTCGGCCTCAGCGCCGGGCAGCGGCAGCGTGTCAACATCGCGCGGGCAATGGTTCTCGAACCGAGCGTGCTGATTCTCGATGAGACACTGTCCGCACTCGATCAGGTCGAGCAGGCCAAGCTCCTCGACCTCTTCGACGATCTCCAGCGCAAACACGGCATCACTTACCTCTACATCTCCCACGACCTTGCCATGGTGCGGCGCGCCTGCGCGCGGATCGCGGTCATGTATCTCGGCAAGATCGTCGAGATCGGGGATAACGAGACAATCTTCGATGAGCCCGCCCATCCCTATACGCGTACGCTTCTGAGCTCGGTGAGCACCGTCGAGGCAAAACCATTCCTGCCGAAGGATTACCTGCTCGAAGGCGAGCCACCCGATCCGATCCATATTCCCGAAGGCTGCTCGTTCCGCAGCCGCTGTCCCTTCGTCATCGAGACCTGTCGGAGCGTCGAGCCGGCGCTATCGACCAGAGCCGGCACAAGCGCAGCCGCGTGCCATCTCGGCCTGGAGCGCCTACCGATGCCTTCTGTCATGACGCCGGGGCGCACCGGATCGGATTTGAAACAAATGGACAGCCTATGA
PROTEIN sequence
Length: 274
VNGVDVATLHGDALLSMRRRFQLLLQDPYNSIPSHVSIGTTIAEPLRIHRLASGNGLRERVGAVMQEVGLSPDLYDALPVGLSAGQRQRVNIARAMVLEPSVLILDETLSALDQVEQAKLLDLFDDLQRKHGITYLYISHDLAMVRRACARIAVMYLGKIVEIGDNETIFDEPAHPYTRTLLSSVSTVEAKPFLPKDYLLEGEPPDPIHIPEGCSFRSRCPFVIETCRSVEPALSTRAGTSAAACHLGLERLPMPSVMTPGRTGSDLKQMDSL*