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SCNpilot_expt_1000_bf_scaffold_40202_curated

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Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_40202_curated_1
Mesorhizobium sp. LNHC252B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3..281)
DNA (279bp) protein (93aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI0003780C72
XRE family transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:ESY71470.1}; TaxID=1287252 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC252B00.;"
SCNpilot_expt_1000_bf_scaffold_40202_curated_2
R_Rokubacteria_68_19, Rokubacteria, Bacteria

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690..1256
DNA (567bp) protein (189aa)
hypothetical protein n=1 Tax=Nocardiopsis halophila RepID=UPI00037EBB23
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
SCNpilot_expt_1000_bf_scaffold_40202_curated_3
Cupriavidus sp. SK-4, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(1124..1474)
DNA (351bp) protein (117aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI00037A84B4
Peptidase M20 {ECO:0000313|EMBL:EYS85126.1}; TaxID=574750 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus sp. SK-4.;"
aminoacylase (EC:3.5.1.14); K01436 amidohydrolase [EC:3.5.1.-]
SCNpilot_expt_1000_bf_scaffold_40202_curated_4
unknown

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1627..1941
DNA (315bp) protein (105aa)
hypothetical protein id=12553602 bin=BDI species=Burkholderia thailandensis genus=Burkholderia taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
SCNpilot_expt_1000_bf_scaffold_40202_curated_5
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2278..3099)
DNA (822bp) protein (274aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI00037721C1 rbh
Glutathione import ATP-binding protein GsiA {ECO:0000313|EMBL:EYR81116.1}; EC=3.6.3.- {ECO:0000313|EMBL:EYR81116.1};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
oligopeptide/dipeptide ABC transporter ATPase; K02031 peptide/nickel transport system ATP-binding protein; K02032 peptide/nickel transport system ATP-binding protein rbh
SCNpilot_expt_1000_bf_scaffold_40202_curated_6
unknown

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3552..3818
DNA (267bp) protein (89aa)
Uncharacterized protein n=1 Tax=Burkholderia ambifaria MEX-5 RepID=B1TED9_9BURK
SCNpilot_expt_1000_bf_scaffold_40202_curated_7
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4065..4220)
DNA (156bp) protein (52aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI000380CD34
Oligopeptide ABC transport system permease protein AppC {ECO:0000313|EMBL:EYR81115.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
ABC transporter inner membrane protein; K02034 peptide/nickel transport system permease protein
Displaying 7 items

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