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SCNpilot_expt_1000_bf_scaffold_5013_curated_2

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: comp(603..2411)

Top 3 Functional Annotations

Value Algorithm Source
ABC transporter, ATP-binding protein n=2 Tax=Rhizobiales RepID=V5CCN3_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 92.4
  • Coverage: 602.0
  • Bit_score: 1082
  • Evalue 0.0
  • rbh
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EYR84436.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 92.4
  • Coverage: 602.0
  • Bit_score: 1082
  • Evalue 0.0
ABC transporter ATP-binding protein/permease; K06147 ATP-binding cassette, subfamily B, bacterial similarity KEGG
DB: KEGG
  • Identity: 57.7
  • Coverage: 598.0
  • Bit_score: 655
  • Evalue 1.80e-185
  • rbh

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1809
ATGCCCGCTTCGACGACATCCGCTCCCCTTTCCTCCGGCAGCCGCCATCCCCTGCGCGTGCTGCTTTCGCTGGTCAGCGACGAGAAGGGCCGCGTCGTGCGCGCCGTCGCCTGCTCCGTCATCAACAAGGTCTTCGACGTGATGCCGGAGATCCTGATCGGCATCGCGCTCGACGTGGTGGTGCGCGGCAAGGATTCCTTCGTCGCCAAAATCGGCATCACCGATCCGGTGCAGCAGCTCACGCTGCTCGGCATCGCGACCTTCCTCATCTGGTTCGGCGAATCGCTCTTCGAATATTTCTACCAGATCCTCTGGCGCGGCCTCGCCCAGGACGTGCAGCACCGGCTGCGCATCCTGGGCTACGACCACGCGCAGCACCTGCCGTCGAGCTTCTACGAGGAAAACCGCTCGGGCGACCTCGTGGCGGTGCTGAACGACGACATCAACCAGCTCGAGCGCTTCCTCGACCGCGGCGCCAACGAACTGATCCAGACCTTCGCCGCGGTCATTCTCGTCGGCGCCGTCTTCTTCATCGTCAGCCCGCTCATCGCCGTGATCGCGTTCACGCCGGTGCCGGCGATCATCGCGGGCGCCTTCTGGTTCCAGCGCCGGGCGCAGGCGCGCTACGATGCGGTGCGCGCAAGGGCGGGCGGGCTCGGTGCGCGGCTCACCACCAACCTTCAGGGCCTCCAGACCATCCGCGCCTTCGGCGCCGAGGCGCGCGAGACGGCCTCGCTGACGAAGGAGAGCCTCGGCTATGTCGAGGCGAACCGGGCGGCGATCCGCGTCTCCTCCGCCTTCATCCCGATCATCCGCATGGCGATCCTGTCGGGATTCCTTGCCACCTTCCTCATCGGCGGATGGCTGACCCTGACCGGCCAAATGCAGGTCGGCGCCTACGGCCTCCTCGTCTTCCTGACGCAGCGCCTGCTCTGGCCGATGACGGGCCTTGCGGAAATCGCCGACCTCTACGAGCGCGCCATGGCCTCGACGCGCCGCATCCTGCGCCTGCTCGACGAACCGCGCGGCGAGCCGCACGGCACGCACGACGTGCCGGTCACCGGCCGCTTCGAGATCGACGGCGTCGGCTTCCGCTATGCGACGAGCCCCGGCGGCGTCACGGACATCGATCTTGCCATCCGGGCGGGCGAGACGGTGGCGCTCGTCGGCCCCACCGGCGGCGGCAAGTCGACGCTCATCAAGCTGCTCGGCCTCTTCATCCGCCCGCAGAAGGGCCGCATCCTGCTCGACGGCGTGCCGCTCGCCGACTGGTCGGGCGAGCGGCTGCGCCGCAGCATGGCCTGGGTGCCGCAGGAGGTGACGCTGTTTGCCGGCTCGATCGCCGACAACATCGCCTATGGCAGGCCCGAGGCGAGCCGGGCGGAGGTGGAGGCGGCCGCACGGCTTGCGGAAGCGGACGGCTTCATCCGCGCGCTGCCGGAGGGCTACGAGAGCCAGATCGGCGAATACGGCCAGAAGCTTTCCGGCGGCCAGCGCCAGCGCATCGCGCTTGCCCGTGCCCTGCTGATCGACCCCGCCGTCCTCATCCTCGACGAGGCGACCAGTGCCGTCGACAACGAGACGGAGGCGGCGATCCAGCGCTCGCTCGCCAAGATGAAGGGCAAGCGCACCGTGATCCTCGTCGCCCATCGGCTCAGCACCGTGGTACATGCCGACGCGATCCATGTGATGGATGGCGGCCGGATCATCCAGTCCGGAACGCACGACGCCCTCGTTGACTGTCCCGGCCTCTACCGCAATCTCTGGAACATCCAGACCGGACATGCGGAAATCGAGACGGCGGAGTAA
PROTEIN sequence
Length: 603
MPASTTSAPLSSGSRHPLRVLLSLVSDEKGRVVRAVACSVINKVFDVMPEILIGIALDVVVRGKDSFVAKIGITDPVQQLTLLGIATFLIWFGESLFEYFYQILWRGLAQDVQHRLRILGYDHAQHLPSSFYEENRSGDLVAVLNDDINQLERFLDRGANELIQTFAAVILVGAVFFIVSPLIAVIAFTPVPAIIAGAFWFQRRAQARYDAVRARAGGLGARLTTNLQGLQTIRAFGAEARETASLTKESLGYVEANRAAIRVSSAFIPIIRMAILSGFLATFLIGGWLTLTGQMQVGAYGLLVFLTQRLLWPMTGLAEIADLYERAMASTRRILRLLDEPRGEPHGTHDVPVTGRFEIDGVGFRYATSPGGVTDIDLAIRAGETVALVGPTGGGKSTLIKLLGLFIRPQKGRILLDGVPLADWSGERLRRSMAWVPQEVTLFAGSIADNIAYGRPEASRAEVEAAARLAEADGFIRALPEGYESQIGEYGQKLSGGQRQRIALARALLIDPAVLILDEATSAVDNETEAAIQRSLAKMKGKRTVILVAHRLSTVVHADAIHVMDGGRIIQSGTHDALVDCPGLYRNLWNIQTGHAEIETAE*