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SCNpilot_expt_1000_bf_scaffold_5013_curated

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Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_5013_curated_1
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3..431
DNA (429bp) protein (143aa)
DNA polymerase {ECO:0000256|RuleBase:RU004460}; EC=2.7.7.7 {ECO:0000256|RuleBase:RU004460};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
DNA polymerase I; K02335 DNA polymerase I [EC:2.7.7.7]
DNA polymerase I n=1 Tax=Rhizobium meliloti RepID=UPI0002F362D0
SCNpilot_expt_1000_bf_scaffold_5013_curated_2
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(603..2411)
DNA (1809bp) protein (603aa)
ABC transporter, ATP-binding protein n=2 Tax=Rhizobiales RepID=V5CCN3_9RHIZ rbh
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EYR84436.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
ABC transporter ATP-binding protein/permease; K06147 ATP-binding cassette, subfamily B, bacterial rbh
SCNpilot_expt_1000_bf_scaffold_5013_curated_3
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2620..3669
DNA (1050bp) protein (350aa)
Endoglucanase Egl n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CSK9_9RHIZ rbh
Endoglucanase Egl {ECO:0000313|EMBL:EYR84435.1}; EC=3.2.1.4 {ECO:0000313|EMBL:EYR84435.1};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
egl; endoglucanase precursor; K01179 endoglucanase [EC:3.2.1.4] rbh
SCNpilot_expt_1000_bf_scaffold_5013_curated_4
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3978..4232
DNA (255bp) protein (85aa)
Acyl carrier protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5D3Z6_9RHIZ
Acyl carrier protein {ECO:0000313|EMBL:EYR77432.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
acyl carrier protein
SCNpilot_expt_1000_bf_scaffold_5013_curated_5
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4229..5401
DNA (1173bp) protein (391aa)
Putative acyl-CoA dehydrogenase n=1 Tax=Shinella zoogloeoides DD12 RepID=V5D8E8_9RHIZ rbh
Putative acyl-CoA dehydrogenase {ECO:0000313|EMBL:EYR77433.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
acyl-CoA dehydrogenase domain-containing protein; K00249 acyl-CoA dehydrogenase [EC:1.3.99.3] rbh
SCNpilot_expt_1000_bf_scaffold_5013_curated_6
unknown

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comp(5319..6146)
DNA (828bp) protein (276aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_5013_curated_7
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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6305..6664
DNA (360bp) protein (120aa)
Uncharacterized protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CJJ3_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EYR77435.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
hypothetical protein
Displaying 7 items

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