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SCNpilot_expt_1000_bf_scaffold_6761_curated_3

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: comp(1527..1796)

Top 3 Functional Annotations

Value Algorithm Source
Uncharacterized protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CTU0_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 94.4
  • Coverage: 89.0
  • Bit_score: 163
  • Evalue 7.80e-38
Uncharacterized protein {ECO:0000313|EMBL:EYR79029.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 94.4
  • Coverage: 89.0
  • Bit_score: 163
  • Evalue 1.10e-37
transmembrane protein similarity KEGG
DB: KEGG
  • Identity: 66.3
  • Coverage: 86.0
  • Bit_score: 125
  • Evalue 7.40e-27

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 270
ATGGAAGCATTGATGCCCATCGTCACACAGCTCATCGCCGGCGCGGTCGGCGGCAATGTCGCGGGCGCCGCCCTGAAACAGGCGGCCGTGAGCGTGGTCGTGCGGACCATCGTCGGCGCAATCGGGGGCGTCGGCGGCGGCCTTCTCCTGCAGATGGTCGGCGGTGAAGCCGGCCTCTCCGGGCTCGTCGCCAACGGCATCGGCGGCCTTGTCGGCGGCGGCGTGCTGACGGCCATCGTCGGCGCGGTGCTCGGCAAGAAGCCGGCCTGA
PROTEIN sequence
Length: 90
MEALMPIVTQLIAGAVGGNVAGAALKQAAVSVVVRTIVGAIGGVGGGLLLQMVGGEAGLSGLVANGIGGLVGGGVLTAIVGAVLGKKPA*