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SCNpilot_expt_1000_bf_scaffold_6201_curated_1

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: 2..1285

Top 3 Functional Annotations

Value Algorithm Source
1,4-alpha-glucan branching enzyme GlgB n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CFR8_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 94.1
  • Coverage: 427.0
  • Bit_score: 869
  • Evalue 1.40e-249
1,4-alpha-glucan branching enzyme GlgB {ECO:0000256|HAMAP-Rule:MF_00685}; EC=2.4.1.18 {ECO:0000256|HAMAP-Rule:MF_00685};; 1,4-alpha-D-glucan:1,4-alpha-D-glucan 6-glucosyl-transferase {ECO:0000256|HAMAP-Rule:MF_00685}; Alpha-(1->4)-glucan branching enzyme {ECO:0000256|HAMAP-Rule:MF_00685}; Glycogen branching enzyme {ECO:0000256|HAMAP-Rule:MF_00685}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 94.1
  • Coverage: 427.0
  • Bit_score: 869
  • Evalue 1.90e-249
glgB; protein GlgB; K00700 1,4-alpha-glucan branching enzyme [EC:2.4.1.18] similarity KEGG
DB: KEGG
  • Identity: 89.2
  • Coverage: 426.0
  • Bit_score: 825
  • Evalue 7.10e-237

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1284
TCCTGGGGTTACCAGACGACCGGCCTTTATGCGCCGACCGCCCGCTTCGGCGAGCCGGAGGGCTTCGCGCGCTTCGTCAACGGTTGCCACAAGGTCGGCATCGGCGTCATCCTCGACTGGGTGCCGGCGCATTTCCCGACGGACGCGCACGGCCTGCGCTGGTTCGACGGCACGGCGCTCTACGAGCACGAGGACCCGCGCAAGGGCTATCATCCCGACTGGAACACGGCGATCTACAATTTCGGCCGCGCCGAGGTGCTCGCCTATCTCATCAACAACGCGCTCTACTGGGCGGAGAAGTTCCACCTCGACGGCCTGCGCGTCGATGCGGTCGCCTCGATGCTCTATCTCGACTATTCGCGCAAGCACGGCGAATGGATCCCGAACGAATATGGCGGCAACGAGAACCTGGAGGCGGTCCGCTNNNNNNNNNNCATGAACCGCCATGTCTATGGCGCCCATCCCGGCATCCTGACGATCGCCGAGGAATCCACCTCCTGGCCGAAGGTCTCTGCCCCCGTTCATGAAGGCGGCCTCGGCTTCGGCTTCAAGTGGAACATGGGCTTCATGCACGACACGCTGCAATATCTCTCGCGCGAGCCCGTGCACCGCAAGTTCCACCACAACGACATGACCTTCGGCCTCATCTACGCCTTCACGGAGAACTTCGTGCTGCCGCTCAGCCACGACGAGGTGGTGCACGGCAAGGGCTCGCTGATCGCCAAGATGACCGGCGACGACTGGCAGAAATTCGCCAATCTCAGGGCCTATTACGGTTTCATGTGGGGCTATCCCGGCAAGAAGCTGCTCTTCATGGGGCAGGAATTTGCCCAGTGGCAGGAATGGAGCGAGGCCCGCACGCTCGACTGGAACCTGCTCGAATATCCGTTGCACGAAGGCATGCGCCGGCTGGTGCGCGACCTCAACGGCACCTATCGCCGCAAGGCCGCGCTGCACGCCCGCGACTGCGAGGGGGAAGGCTTCGAGTGGCTGATCGCCGACGACCGCGACAATTCGGTCTTCGCCTGGCTGCGCAAGGCGCCGGGTGAAAAGCCGATCGCCGTGGTCACCAATTTCACCCCCGTCTACCGCGAGAACTACGGGGTGCCGCTGCCGGTGGAGGGCCGGTGGCGGGAGATCCTCAACACCGATGCCGAGATCTACGGCGGCAGCGGCAAGGGGAACGGCGGCGCCGTGCAGGCCAAGAAGCATGGAAACGGAAAGATCGCAGCCAGCATCACGCTGCCGCCGCTGGCGACGCTGATGCTCGAGCTGGACGCATAG
PROTEIN sequence
Length: 428
SWGYQTTGLYAPTARFGEPEGFARFVNGCHKVGIGVILDWVPAHFPTDAHGLRWFDGTALYEHEDPRKGYHPDWNTAIYNFGRAEVLAYLINNALYWAEKFHLDGLRVDAVASMLYLDYSRKHGEWIPNEYGGNENLEAVRXXXXMNRHVYGAHPGILTIAEESTSWPKVSAPVHEGGLGFGFKWNMGFMHDTLQYLSREPVHRKFHHNDMTFGLIYAFTENFVLPLSHDEVVHGKGSLIAKMTGDDWQKFANLRAYYGFMWGYPGKKLLFMGQEFAQWQEWSEARTLDWNLLEYPLHEGMRRLVRDLNGTYRRKAALHARDCEGEGFEWLIADDRDNSVFAWLRKAPGEKPIAVVTNFTPVYRENYGVPLPVEGRWREILNTDAEIYGGSGKGNGGAVQAKKHGNGKIAASITLPPLATLMLELDA*