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SCNpilot_expt_1000_bf_scaffold_6201_curated_3

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: 2625..4064

Top 3 Functional Annotations

Value Algorithm Source
Glycogen synthase n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CBR9_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 90.0
  • Coverage: 479.0
  • Bit_score: 879
  • Evalue 1.10e-252
  • rbh
Glycogen synthase {ECO:0000256|HAMAP-Rule:MF_00484}; EC=2.4.1.21 {ECO:0000256|HAMAP-Rule:MF_00484};; Starch [bacterial glycogen] synthase {ECO:0000256|HAMAP-Rule:MF_00484}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 90.0
  • Coverage: 479.0
  • Bit_score: 879
  • Evalue 1.60e-252
glga3; hypothetical protein; K00703 starch synthase [EC:2.4.1.21] similarity KEGG
DB: KEGG
  • Identity: 69.1
  • Coverage: 479.0
  • Bit_score: 691
  • Evalue 2.40e-196
  • rbh

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1440
ATGAAAATCCTTTCGGTGGCATCCGAAGTATTCCCGCTCATCAAGACGGGAGGCCTCGCCGACGTCGCCGGCGCATTGCCGATCGCGCTCGCCGGGCATGGAATCCACATGCGCACGCTGGTGCCCGGCTATCCCGCGGTCATGCAGCGCCTGGCGAAGACCGAGCCGGTCGCCACCTTCGAGGACCTGCTCGGGGAGCCGGCCCGCATCCTCGCCGCCAAGCACGAGGGCCTCGACATCCTCGTGCTCGACGCGCCGGGCTTCTTCGACCGGCAGGGCGGGCCCTATACGGATGCCACCGGCAAGGATTTCGTCGACAACTGGCAGCGCTTCGCCGCGCTGTCGCTCGCGGGCACCGAAATCGCCCGCGGCCTCCTGCCCGGCTGGCAGCCCGACATCGTGCACGCCCACGACTGGCAGGCGGCCATGACGGCCGTCTACATGCGCTACACCGGCCTCCGGCACATTCCCAGCATCGTCACGGTGCACAACCTCGCCTTCCAGGGCCAGTTCGGGCCGGAGATCTTCGCCGATCTGCGCCTGCCGGCGGAAGCCTTCACCGTGGACGGGCTCGAATATTACGGCGACGTGGGCTTCCTCAAGGGCGGCCTTCGCACAGCCTGGTCGATCACCACCGTCAGCCCCACCTATGCGCACGAGATCATGACGCCGGAATACGGCATGGGGCTCGAAGGCCTCATCAACGACCGCGCGGCCGACCTCGTCGGCATCGTCAACGGCATCGACACCGCCGTATGGGACCCGCAGACGGATGCGCACATCGCCCGTCCCTTCGCGGCCGGCTCGCTGAAGAAGCGCGCGGCCAACCGCCAGGCCCTCATCGAGCGCTTCAACCTCGTCGAGGACGACGGGCCGATCTTCTGCATCGTCAGCCGCCTTACCTGGCAGAAGGGCATCGACATCATCGCCGAGGTCGCCGACTGGATCGTGCAGCACGGCGGCAAGCTCGCGGTGCTCGGCTCCGGCGACCAGGGGCTGGAAGGCGCGCTGCTGGCCGCCGCCTCGCGCCACCGCGGCCATGTCGGCATCGTCATCGGCTACAACGAGCCGCTGTCCCATCTCATGCAGGCCGGCGCCGACGCGATCCTCATCCCGTCGCGCTTCGAGCCCTGCGGCCTCACCCAGCTCTATGGCCTGCGCTATGGCTGCATCCCCGTCGTCGCGCGCACCGGCGGCCTTGCCGATACGGTGATCGACGCCAACGAGGCCGCCCTTTCCGCCCGCGTCGCCACGGGCTTCCAGTTCACGCCGATCAACGCCGAGGGCCTGCGCCAGGCGTTGCGCCGGGTCTTCAGGGCATGGCATGAACCGAAAATCTGGGCCCGCATCCAGAACCAGGGCATGAAGTCGGACGTTTCGTGGGAAAACAGCGCCGCGCGCTACGCCGACCTCTATTCCAGCCTCCTTTCGCGAGTATGA
PROTEIN sequence
Length: 480
MKILSVASEVFPLIKTGGLADVAGALPIALAGHGIHMRTLVPGYPAVMQRLAKTEPVATFEDLLGEPARILAAKHEGLDILVLDAPGFFDRQGGPYTDATGKDFVDNWQRFAALSLAGTEIARGLLPGWQPDIVHAHDWQAAMTAVYMRYTGLRHIPSIVTVHNLAFQGQFGPEIFADLRLPAEAFTVDGLEYYGDVGFLKGGLRTAWSITTVSPTYAHEIMTPEYGMGLEGLINDRAADLVGIVNGIDTAVWDPQTDAHIARPFAAGSLKKRAANRQALIERFNLVEDDGPIFCIVSRLTWQKGIDIIAEVADWIVQHGGKLAVLGSGDQGLEGALLAAASRHRGHVGIVIGYNEPLSHLMQAGADAILIPSRFEPCGLTQLYGLRYGCIPVVARTGGLADTVIDANEAALSARVATGFQFTPINAEGLRQALRRVFRAWHEPKIWARIQNQGMKSDVSWENSAARYADLYSSLLSRV*