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SCNpilot_expt_1000_bf_scaffold_6201_curated_6

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: comp(5679..6641)

Top 3 Functional Annotations

Value Algorithm Source
Uncharacterised protein {ECO:0000313|EMBL:CRD85149.1}; TaxID=520 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella pertussis.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 37.1
  • Coverage: 334.0
  • Bit_score: 162
  • Evalue 8.70e-37
Uncharacterized protein id=24548379 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Bifidobacterium bifidum CAG:234 genus=Bifidobacterium taxon_order=Bifidobacteriales taxon_class=Actinobacteria phylum=Actinobacteria tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin similarity UNIREF
DB: UNIREF100
  • Identity: 33.6
  • Coverage: 271.0
  • Bit_score: 101
  • Evalue 1.30e-18

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Taxonomy

Bordetella pertussis → Bordetella → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 963
ATGGCGCACGAAATGGCAAAGGCTGTCGAGCACGAGCTGGCGCACGACGGGGTGCTCCCCGGCGATCGTGTTGCCGCAGCCGGTGTCGTTGATCAGTTCGCCCGGCCGGTCGGGCACATGGCGGTAGTAGGTGAGGTTGTCGAGGCCGCGCATGGAGAGCGTCGCGCCGTGGCGGTCGCTCTCGCCGGAATGGTTGAAGACGAGGTCGAGGATGACCCCGACGCCTTCGGCGCGCAGCGTCGCGACGGTGTCGGCGAGCTCCTTCATGCCGCCGGGCACGAGGCGCGGGTCGAGCGCCATCAGGGCGACCGGGTTGTAGCCCCAGCTGTTGGACAGGCCGAGCGGCGGCAGGTGGCGCTCGTCGATCCAGGCGGTGATCGGCATCAGCTCCACCGCATCGACGCCAAGGCGCTTGAGATGCGCAAGCACGGCGGGATGGGCGAGGGCGCCGACGGTGCCGCGCATTGCCTCCGGCACATCGGGATGCAGCATGGTGAAGGCACGCACGGCGATTTCGTAGACGAAGCCGCCGGGGCGGAAGATGGGCGGCTTCACCGCGACGGGCCGGTCGCGCGTGACGATCGCCTTGGGCACGATGTCGGCCGTGTCCACGCCGAAGCGGGCAAGCCGGCCGTCATGCACGAAGCGGCGGTCCAGTTCCTTGGCATAGGGATCGACGAGCAGCTTCGCCGGATCGAACCAGAGGCCGTGGTCCGGCGAATAGACGCCGTCGGCGCGAAAGCCGTAGCGCGTGCCGGCCGCCGCGCCTTCGACAAAGACGCGGTGGAAGCCGTTCTCGTCACGGCCCATTGCAAGGCGGGCCAACTCCCTGTCGCCCTCGTTGTCGAACAGGCAGAGATCGACGCGGGCGGCGTCGCGCGAATAGACGGCAAACTCCACCCCGTCCCCGGAGAGCGTGGCGCCCGGTGCGAAGGAGGGGGCGGTGAAGGCCATGTTACGTGA
PROTEIN sequence
Length: 321
MAHEMAKAVEHELAHDGVLPGDRVAAAGVVDQFARPVGHMAVVGEVVEAAHGERRAVAVALAGMVEDEVEDDPDAFGAQRRDGVGELLHAAGHEARVERHQGDRVVAPAVGQAERRQVALVDPGGDRHQLHRIDAKALEMRKHGGMGEGADGAAHCLRHIGMQHGEGTHGDFVDEAAGAEDGRLHRDGPVARDDRLGHDVGRVHAEAGKPAVMHEAAVQFLGIGIDEQLRRIEPEAVVRRIDAVGAKAVARAGRRAFDKDAVEAVLVTAHCKAGQLPVALVVEQAEIDAGGVARIDGKLHPVPGERGARCEGGGGEGHVT*