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SCNpilot_expt_1000_bf_scaffold_1697_curated_4

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: 2587..4152

Top 3 Functional Annotations

Value Algorithm Source
Putative periplasmic serine endoprotease DegP n=1 Tax=Shinella zoogloeoides DD12 RepID=V5EVC0_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 89.5
  • Coverage: 524.0
  • Bit_score: 934
  • Evalue 5.50e-269
  • rbh
Putative periplasmic serine endoprotease DegP {ECO:0000313|EMBL:EYR81184.1}; EC=3.4.21.107 {ECO:0000313|EMBL:EYR81184.1};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 89.5
  • Coverage: 524.0
  • Bit_score: 934
  • Evalue 7.70e-269
dop; serine protease similarity KEGG
DB: KEGG
  • Identity: 74.9
  • Coverage: 525.0
  • Bit_score: 773
  • Evalue 3.90e-221
  • rbh

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1566
ATGTCCAAGATTCCCGCATTCCGTCCGGGCCTCAAGACCGTCCTGAAGACGACCACCGTCGCCGGGCTTGCGGCCGTCATGCTTGCGACCGGCATTCCCGCGCGCGTTACCGAGAGCTTTGCCGAAGCCGTTACCGTCCAGGCGCCGCAGGTTGCGAGCTTCGCCGACGTCGTCGCGGCCGTGTCCCCGGCGGTCGTTTCCGTGCGCGTCCAGTCCGATGCCAAGCCGGCGAACGACGAGAGCAACTTCAGCTTCAACTTCGGCGGCCGCGGCTTCGACGAGCTCCCCGACGATCACCCGCTGAAGCGCTTCTTCCGCGAGTTCGGCGGCCAGGACCAGTTCCGCGGCGACCGTGGCCCCGATCGCCGCTTCGGCGACCGTCGCGGCCCGAACCGCAAGCCGCATCTGCGCCCGACCGCACAGGGTTCCGGCTTCTTCATCTCCGAAGACGGCTACATCGTCACCAACAACCATGTCGTCAGCGACGGCTCGGCCTTCACGGTCGTCATGAACGACGGCACGGAGCTCAACGCGACGCTCGTCGGCAAGGACAGCCGCACGGACCTCGCCGTGCTGAAGGTCGACGAGAAGGACAAGCGCAAGTTCACCTATGTCAGCTTCGCCGATGACAACCAGATCCGCGTCGGCGACTGGGTGGTCGCCGTCGGCAACCCGTTCGGCCTCGGCGGCACGGTGACGGCCGGCATCATCTCGGCCCGCGGCCGCGACATCGGCTCCGGCCCCTACGACGACTACCTCCAGGTGGACGCCGCCGTGAACCGCGGCAATTCGGGCGGCCCGACCTTCAACCTCTCCGGCCAGGTCGTCGGCATCAACACCGCGATCTTCTCGCCCTCGGGCGGCAATGTCGGCATCGCCTTCGCCATTCCCGCCTCCGTCGCCAAGGGCGTCGTCGCCAACCTGATGAAGGACGGCAAGGTCGACCGCGGCTGGCTCGGCGTGCAGATCCAGCCGGTGAGCCGTGACATCGCCGACTCGCTCGGCCTTGCCGATGCGGCGGGCGCCCTCGTCGTCGAGCCGCAGGCCGACTCCCCCGGTGCCAAGGCCGGCATCAAGAAGGGCGACGTGATCACCGCGCTCGACGGCGAACCCGTCAAGGACCCGCGTGACCTCGCCCGCCGCGTCGCCGACATCGCGCCCGGCAAGAAGATCGACGTGACGATCTGGCGTGACGGCAAGTCGCAGACCGTCCCTGTCGAGATCGGCACGCTTGCCGGCGAGCAGATCAAGGCCTCGGCAACCCCGGACGAGGCGGCTCCGGCCGAGGAGAATAGCGCACAGGCGCTCGCCGATCTCGGCATCTCGGTGACGCCGGGCGATGACGGCCTGACCGTCTCCGCCGTCGATCCGGACTCCGACGCCAGCGACCGCGGCCTCAAGGAAGGCGACCGCATCACTTCCGTCAACAACCAGACCGTCAAGTCGGCCGACGAAGTGATGAAAGTGATCGAGGGCGCCCGCAAGGACGGCCGCACCAAGGCGCTGTTCCAGGTCGAGACCAAGGACGGCAGCCGCTTCCTCGCGCTGCCGATCGACCAGGGCTGA
PROTEIN sequence
Length: 522
MSKIPAFRPGLKTVLKTTTVAGLAAVMLATGIPARVTESFAEAVTVQAPQVASFADVVAAVSPAVVSVRVQSDAKPANDESNFSFNFGGRGFDELPDDHPLKRFFREFGGQDQFRGDRGPDRRFGDRRGPNRKPHLRPTAQGSGFFISEDGYIVTNNHVVSDGSAFTVVMNDGTELNATLVGKDSRTDLAVLKVDEKDKRKFTYVSFADDNQIRVGDWVVAVGNPFGLGGTVTAGIISARGRDIGSGPYDDYLQVDAAVNRGNSGGPTFNLSGQVVGINTAIFSPSGGNVGIAFAIPASVAKGVVANLMKDGKVDRGWLGVQIQPVSRDIADSLGLADAAGALVVEPQADSPGAKAGIKKGDVITALDGEPVKDPRDLARRVADIAPGKKIDVTIWRDGKSQTVPVEIGTLAGEQIKASATPDEAAPAEENSAQALADLGISVTPGDDGLTVSAVDPDSDASDRGLKEGDRITSVNNQTVKSADEVMKVIEGARKDGRTKALFQVETKDGSRFLALPIDQG*