ggKbase home page

SCNpilot_expt_1000_bf_scaffold_1697_curated_11

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: comp(13111..13803)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI0003651309 similarity UNIREF
DB: UNIREF100
  • Identity: 69.7
  • Coverage: 228.0
  • Bit_score: 318
  • Evalue 4.90e-84
  • rbh
transcriptional regulator-like similarity KEGG
DB: KEGG
  • Identity: 69.4
  • Coverage: 229.0
  • Bit_score: 314
  • Evalue 2.20e-83
  • rbh
Transcriptional regulator-like protein {ECO:0000313|EMBL:ABB10945.1}; TaxID=482957 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepacia complex.;" source="Burkholderia lata (strain ATCC 17760 / LMG 22485 / NCIMB 9086 / R18194; / 383).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 69.4
  • Coverage: 229.0
  • Bit_score: 314
  • Evalue 9.90e-83

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Burkholderia lata → Burkholderia → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 693
ATGGCCCGATCCGAACGACTGCTCGCCCTCCTCCAGCTTCTGCGCCGCCACCGCCATCCGGTGAGCGGCGCAACGCTTGCCGGCGAGCTCGGCGTCAGCATCCGCACGCTCTACCGCGACATCGCCTCGCTGCAGGCGCAGGGCGCCGATATCGAGGGCGAGCCGGGCGTCGGCTATGTGCTGCGCCCCGGCTTCATGCTGCCGCCGCTGATGTTCTCGCAGGGCGAGCTGGAGGCGCTGGTGCTCGGCTTCCGCTGGGTGCAGAAATTCGCCGATGCGCCCGTGACGAAGGCGGCGACGGATGCGCTCGCCAAGATTTCCGCCGTGCTGCCGGCCGAGCTTGCGGCGGAACTGGAGAACACGGCGCTGCTGGTCGGGCCGCGCAGGATCGTCGACGGCGAGATCGTCGATCTTGCCGTGATCCGCGCGGCGATCCGCCGGGAGCGCAAGCTCCGGCTGTCCTATTGCGACGCGGCGGGCGTGCGCAGCGAGCGCGTGGTCTGGCCGGTCGCGCTCGGCTATTTCGAGGAGACGCGCATGCTGGTCGCCTGGTGCGAATGGCGGCAGGGCTACCGGCATTTTCGAACGGAGCGCATGGCGGCGATTTCGCTTCTGGAGGCGCGCTATCCGCGCCGGCGCGCGGCGATGCTGAAGGAATGGCGGGAGACGGAAGCGGGGCCGCGGCGGGCGTAA
PROTEIN sequence
Length: 231
MARSERLLALLQLLRRHRHPVSGATLAGELGVSIRTLYRDIASLQAQGADIEGEPGVGYVLRPGFMLPPLMFSQGELEALVLGFRWVQKFADAPVTKAATDALAKISAVLPAELAAELENTALLVGPRRIVDGEIVDLAVIRAAIRRERKLRLSYCDAAGVRSERVVWPVALGYFEETRMLVAWCEWRQGYRHFRTERMAAISLLEARYPRRRAAMLKEWRETEAGPRRA*