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SCNpilot_expt_1000_bf_scaffold_3602_curated_11

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: 8147..9526

Top 3 Functional Annotations

Value Algorithm Source
Fis family transcriptional regulator {ECO:0000313|EMBL:KEA08339.1}; TaxID=359 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium rhizogenes.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 76.2
  • Coverage: 463.0
  • Bit_score: 692
  • Evalue 4.50e-196
two-component response regulator protein similarity KEGG
DB: KEGG
  • Identity: 76.2
  • Coverage: 463.0
  • Bit_score: 691
  • Evalue 1.30e-196
  • rbh
Two-component response regulator protein n=1 Tax=Agrobacterium radiobacter (strain K84 / ATCC BAA-868) RepID=B9JP38_AGRRK similarity UNIREF
DB: UNIREF100
  • Identity: 76.2
  • Coverage: 463.0
  • Bit_score: 691
  • Evalue 4.20e-196
  • rbh

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Taxonomy

Agrobacterium rhizogenes → Agrobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1380
ATGGTGCAGAACCGAAGCGAGACGGAGCCGCCCGGCCTGGCGGAATTCGGCCCCTGGCTCGCGCAGGCCGCGATCCTCGTCATCGATGACGAGCCCGGTATCTGCAACTTCCTGGTCAAGACCCTGCGCCCGCGCTGCCGGCTGATCAAGGTCGCCGCCAACACCCTGGAGGCATCGCGCAAGCTCGACGAGCAGAATTTCGACGTCGTGATCATGGACAACATCATGCCCGGCCAGACGGGGCTCGAATGGCTGGCCGAGCAGCGGGCCATCGGATTTTTCGCTGATGTCATCCTGATGACCGCCTATGCCGATCTCGACACGGCCATCGATGCGCTGAGGGCCGGGGTGGTGGATTTCATCCTGAAACCCTTCCGCTCCAACCAGCTGCTCAATGCCATCGCCCGCTGCCTCGACCGCAAGCGGCTGCAGCGCGAGAATGACGTGTTGCGCCACGAGCTGACCTCGCCATCGCATCAGCTGCTCCTGCGCAACAGGCTTCTGGGGATCTCGAAGCCCATCCAGCATGTCCGGGAGACGATCGCTCGCGTCGCGCCGCTGCCGACCTCCGTGCTCCTCACAGGCCAGTCGGGCACGGGCAAGGAGGTTGCCGCACGCTCCCTGCACATGCTCTCCGACCGGGCAGACAAGCTGTTCGTGCCGATCAATTGCGGAGCGATCCCCGCCGACATGATCGAAAGCGAGCTGTTCGGCCATCTGAAGGGTGCCTTCACCGGGGCGAGCCGCAGCCGCGAGGGCTTGATGCTGCACGCCGATGGCGGCACGATGTTTCTCGATGAGGTCGGGGAATTGCCCCTGCCGATGCAGACCAAGCTGCTGCGCGTACTGGAAGACCGGCGGGTGCGGCCCGTCGGCTCGGAACGCGAGCTTCCCTTCGATGCGCGTTTCATCTTCGCTACCAATGCCGACCTCGCCAAGCGGGTGGAGGCGGGCACGTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCGCTGCGCGACCGGGGCGACGACGTGGTGGAACTCGCCGACATGTTCATGCGGGAAATGAGCCAGCAGCTCGGCATGCCGGCCATAACCATCGACGACAGGGCGCAAGCCGCCTTGCTGCGCTACGACTGGCCCGGCAACATTCGCGAACTGCGCAACCTCATCGAGCGCACCATCATCCTGGGCAGTTTTCCCGCCAATATCGGCCCGCATGACCAGGAAGAGGATCGTCCACGCAGCGATAATCTCGGGGAAATGGAGCGGCGGCATATCCTCGCCGTGCTGCGGGAATCACACGGGGATAGGGAAGAGGCGGCGCGTCGGCTTGGCATCTCGCGCAAGACCATCGATCGAAAGTATGCAAGCTGGTATGGCTGA
PROTEIN sequence
Length: 460
MVQNRSETEPPGLAEFGPWLAQAAILVIDDEPGICNFLVKTLRPRCRLIKVAANTLEASRKLDEQNFDVVIMDNIMPGQTGLEWLAEQRAIGFFADVILMTAYADLDTAIDALRAGVVDFILKPFRSNQLLNAIARCLDRKRLQRENDVLRHELTSPSHQLLLRNRLLGISKPIQHVRETIARVAPLPTSVLLTGQSGTGKEVAARSLHMLSDRADKLFVPINCGAIPADMIESELFGHLKGAFTGASRSREGLMLHADGGTMFLDEVGELPLPMQTKLLRVLEDRRVRPVGSERELPFDARFIFATNADLAKRVEAGTXXXXXXXXXXXXXXXXLRDRGDDVVELADMFMREMSQQLGMPAITIDDRAQAALLRYDWPGNIRELRNLIERTIILGSFPANIGPHDQEEDRPRSDNLGEMERRHILAVLRESHGDREEAARRLGISRKTIDRKYASWYG*