ggKbase home page

SCNpilot_expt_1000_bf_scaffold_2746_curated_3

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: comp(1423..2103)

Top 3 Functional Annotations

Value Algorithm Source
GntR family transcriptional regulator {ECO:0000313|EMBL:KDP72347.1}; TaxID=106592 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Ensifer.;" source="Ensifer adhaerens (Sinorhizobium morelense).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 84.9
  • Coverage: 225.0
  • Bit_score: 376
  • Evalue 2.10e-101
Transcriptional regulator, GntR family n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CT20_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 84.0
  • Coverage: 225.0
  • Bit_score: 372
  • Evalue 3.60e-100
  • rbh
GntR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 83.9
  • Coverage: 223.0
  • Bit_score: 370
  • Evalue 3.30e-100
  • rbh

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Ensifer adhaerens → Ensifer → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 681
ATGCCCGAATTCGAAACCCTCGACCATTCCAACCTCAACAGCGTCGTCTATGGCGCGCTGTGCGATGCGTTGATCCAGGGCCGCTTCAAGCCCGGCGACCGGCTGAAGATCCGCGATCTGGCCGAGCAGTTCGGCACCAGCGTCACGCCCATCCGCGATGCGATCCTGAAGCTCGTCAACGACGAGGCGATCATCTTCCGCTCGCCGCGCGACATCCGCATCCCGGCGATGAGCGAGGCGCGTTACAGGGAAATCCGGGCGATCCGCGTGCGGCTGGAGGGGTTGGCGGCCGAGACCGCCGCGCAGGTGGCCACCTCCGCCGATATTGCCGCGCTCGAGGCGATTATCCGCGAAAACGAGGCCGCCATTGCCGACGGCGACCGGCTGAAGGGCGCCGAACTCAACCAGATGTTCCATTTCATGCTGCCGAAGATTGCCGGCCTTCCCGTGCTCAACGGCATCCTGCGCCGGCTCTGGCTGCAGATGGGCCCGCTGATCTCGGATGCCTATCTGCCGGGCGGGCGGGCGATGATCGACCATCACTATCCCGTCGTGGAGGCGCTGAAGCGCCACGATCCGGCCGCCGCCTCGATGGCCATCGTCGATGACATCCTGCTCGGCGGCAAGCCGCTCCTGGAGCGCATCTGGCATGCCGGACCGCGCGAGGCGCCGCGCCTCTGA
PROTEIN sequence
Length: 227
MPEFETLDHSNLNSVVYGALCDALIQGRFKPGDRLKIRDLAEQFGTSVTPIRDAILKLVNDEAIIFRSPRDIRIPAMSEARYREIRAIRVRLEGLAAETAAQVATSADIAALEAIIRENEAAIADGDRLKGAELNQMFHFMLPKIAGLPVLNGILRRLWLQMGPLISDAYLPGGRAMIDHHYPVVEALKRHDPAAASMAIVDDILLGGKPLLERIWHAGPREAPRL*