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SCNpilot_expt_1000_bf_scaffold_2802_curated_1

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: comp(303..467)

Top 3 Functional Annotations

Value Algorithm Source
UPF0391 membrane protein SHLA_486c00060 n=1 Tax=Shinella zoogloeoides DD12 RepID=V5D0Q1_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 98.1
  • Coverage: 54.0
  • Bit_score: 101
  • Evalue 3.80e-19
UPF0391 membrane protein SHLA_99c000190 {ECO:0000256|HAMAP-Rule:MF_01361}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 98.1
  • Coverage: 54.0
  • Bit_score: 101
  • Evalue 5.30e-19
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 79.6
  • Coverage: 54.0
  • Bit_score: 91
  • Evalue 1.20e-16

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 165
ATGCTGTATTATGCTGTTGTCTTTCTCGTGATTGCACTTGTCGCCGGCGTGCTCGGCTTCGGCGGCATCGCCGGTGCTTCGGCCGGTATCGCGCAGATCCTGTTCTTCGTCTTCCTGGCGCTTCTGGTCCTGTCCCTGATTGCGGGCCTGTTCCGCAGGGCATGA
PROTEIN sequence
Length: 55
MLYYAVVFLVIALVAGVLGFGGIAGASAGIAQILFFVFLALLVLSLIAGLFRRA*