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SCNpilot_expt_1000_bf_scaffold_2803_curated_8

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: 3876..5276

Top 3 Functional Annotations

Value Algorithm Source
L-serine dehydratase SdaA {ECO:0000313|EMBL:EYR79882.1}; EC=4.3.1.17 {ECO:0000313|EMBL:EYR79882.1};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 94.2
  • Coverage: 466.0
  • Bit_score: 881
  • Evalue 5.30e-253
L-serine dehydratase SdaA n=1 Tax=Shinella zoogloeoides DD12 RepID=V5EZE8_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 93.9
  • Coverage: 446.0
  • Bit_score: 842
  • Evalue 2.60e-241
  • rbh
L-serine dehydratase; K01752 L-serine dehydratase [EC:4.3.1.17] similarity KEGG
DB: KEGG
  • Identity: 88.0
  • Coverage: 466.0
  • Bit_score: 836
  • Evalue 5.80e-240
  • rbh

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1401
ATGTTTCTTTCGGTTTTTGATGTCTTCAAGATCGGTATCGGGCCGTCGAGCTCCCATACGATGGGGCCGATGTCGGCGGCGAACCGGTTCCTGGACCTGATCCTGTCGGACGACTGGCCGCGGCCGGCCGGAGCCCGGGTCACCGCCATCCGCATGAGCCTGCACGGCTCGCTCGCCTATACCGGCGTCGGCCATGGCTCCGACCGCGCCGTCATCCTCGGCCTGATGGGCGAGCGGCCGGATTCGGTCGATCCCGACCGGATGGACGCGATCGTCGCCGAGGTCGAGCATAGCGGCCGCATCACGCCGCCCGACCATCCCGGCTACGCCTTCCAGCCGAAGACCGATCTTATCTTCGACAAGAAGAATCCGCTGCCCGGCCATGCCAACGGCATGACCTTCAGCGCCTACGACCGCGACGACCGGCTGCTTCTCAAGCGGATCTACTATTCCGTCGGCGGCGGATTCGTCGTCACGGATACCGAGCTGGAGCAGATGCGCACCAGCAAGGCGCGCTCCAGCGACAAGAAAGTGCCGTTCCCCTTTTCCTCCGCCAGGCAGATGCTCGACATGGCCGAGCGCGCCAACATGACGATCGCGCAGATGAAGCGCGCGAACGAGGAAGCCTCCATGTCGCGCGAGGAACTGAATGCCGGCCTCGACCGCATCTGGGAGGCGATGAAGAGCTGCATCGACCGGGGCCTGAAGAACGAAGGCATCATGCCGGGCGGCCTGAAGGTGCGCCGCCGCGCCCGCTCGATCCACGACAAGCTGCAGGAGGAGTGGCGCTCCAACAAGGCGAACCCGCTGCTCGCCAACGACTGGCTGTCCGTCTACGCCATGGCGGTCAACGAGGAGAATGCCGCGGGCGGCCGGGGCGTGACCTCGCCGACCAACGGGGCTGCCGGCGTCGTGCCCGCCACGATCCGCTACTACCTGCATTTCCACGAGGATGCCGACCAGGACGGCATCCGCGACTACCTGCTGACGGCCGCCGCCGTCGGCGGCATCATCAAGCACAACGCCTCGATTTCGGGCGCCGAGGTCGGCTGTCAGGGTGAGGTGGGGTCCGCCTCGGCCATGGCCGCCGCCGGCCTTGCCGCCGTGATGGGCGGCTCTCCGGAACAGGTGGAGAATGCCGCGGAAATCGCGCTGGAGCACCATCTCGGCATGACCTGCGACCCGATCGCCGGCCTCGTGCAGGTGCCCTGCATCGAGCGCAACGCGCTCGGCGCGGTGAAGGCGGTGACGGCTGCCTCGCTCGCCCTCAAGGGCGACGGCAAGCATTTCGTGCCGCTCGACGCCTGCATCGAGACGATGCGCCAGACCGGCGTCGACATGAACGAGAAGTACAAGGAAACCTCCACCGGCGGCCTTGCCGTCAACGTGGTGGAGTGCTGA
PROTEIN sequence
Length: 467
MFLSVFDVFKIGIGPSSSHTMGPMSAANRFLDLILSDDWPRPAGARVTAIRMSLHGSLAYTGVGHGSDRAVILGLMGERPDSVDPDRMDAIVAEVEHSGRITPPDHPGYAFQPKTDLIFDKKNPLPGHANGMTFSAYDRDDRLLLKRIYYSVGGGFVVTDTELEQMRTSKARSSDKKVPFPFSSARQMLDMAERANMTIAQMKRANEEASMSREELNAGLDRIWEAMKSCIDRGLKNEGIMPGGLKVRRRARSIHDKLQEEWRSNKANPLLANDWLSVYAMAVNEENAAGGRGVTSPTNGAAGVVPATIRYYLHFHEDADQDGIRDYLLTAAAVGGIIKHNASISGAEVGCQGEVGSASAMAAAGLAAVMGGSPEQVENAAEIALEHHLGMTCDPIAGLVQVPCIERNALGAVKAVTAASLALKGDGKHFVPLDACIETMRQTGVDMNEKYKETSTGGLAVNVVEC*