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SCNpilot_expt_1000_bf_scaffold_2803_curated_14

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: comp(8626..9822)

Top 3 Functional Annotations

Value Algorithm Source
D-alanyl-D-alanine carboxypeptidase DacF n=1 Tax=Shinella zoogloeoides DD12 RepID=V5EZF1_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 86.7
  • Coverage: 368.0
  • Bit_score: 617
  • Evalue 8.70e-174
  • rbh
D-alanyl-D-alanine carboxypeptidase DacF {ECO:0000313|EMBL:EYR79887.1}; EC=3.4.16.4 {ECO:0000313|EMBL:EYR79887.1};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 86.7
  • Coverage: 368.0
  • Bit_score: 617
  • Evalue 1.20e-173
dac; D-alanyl-D-alanine carboxypeptidase similarity KEGG
DB: KEGG
  • Identity: 62.9
  • Coverage: 410.0
  • Bit_score: 472
  • Evalue 1.10e-130
  • rbh

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1197
ATGAAGAGTAACGTAGTGTCCCGTTCCGTATTCCTCGATTTCCTCCCCCGTCCCGGTCAGGCGATTGCCAATGCGGCGAAAGGTCTGGTGATGATCGGGATGATCGCCACGGTCGCCTGGGCGACGCCGGCGGCGGCAAATCCGAAATATTCCGGCATCGTCATCGATGCGAAGACCGGCAAGGTGCTCTACAGCGAAGACGCGGACGACTTGCGCTATCCCGCCTCGCTCACCAAGATGATGACGCTCTACCTCACCTTCGAGGCGCTGGAAGCCCGCAAGATCCGCCTCGATTCCCGCGTCCCCTTCTCGAAGAACGCCTCGAGCGAGCCGCCGACCAAGCTCGGCGTCGGCGTCGGCAACTCGATCACTGTCGAACAGGCGATCCTCGGCCTGATCACCCGCTCGGCCAACGACGCTTCCACGGCGCTGGCCGAACTGCTCGGCGGATCGGAGGAGCGGTTTACCCGCATCATGACGCAGAAGGCGCGCGCGCTCGGCATGACGCGCACCGTCTACCGCAATGCCAACGGCCTGCCCAACAGCGCGCAGGTGACCACCGCGCGCGACCAGGCCCGCCTCGGCATCGCGCTGCGCCAGCACTTCCCGCAGTACTATTCCTATTTCTCGGTCCGCAGCTTCCGCCTCGGCAAGCAGGTCATCAACGGCCACAACCGCCTGCTCGGCGCGGTTCGCGGCGTCGACGGCATCAAGACCGGCTATACCCGCGCCTCCGGCTATAATCTCGTGACCTCGGCCATGGCCGATGGCCGCAGCGTCGTCGGCGTCGTCATGGGCGGCCGCTCGGGCGCGGCCCGCGACCAGCAGATGCGCAAGCTCATCGCCACCTACATGCCGAAGGCCTCGCGCCGCGGTGGCGGCGACCTGATCGCCCAGACCAGCGACGCACCGACCCTGTCCGCCGAAGTCGCGAGCAGCGCGGCGACCGCCTCGGTCGCCGGTGGCTTCGACCTGCCGGAAAACGGCCCGGTCCCCTCCTACCGCTACAACGAGAGCCATCTCGAAACGGCCTATGCGACGCCGGCAAGCAGCTCGGAAGTCGTCGGCAAGCGCGCGCTCGCCGCGACGCTGAAGCTACAGCGCGACGCCGCGGTTCCGCAGGAAGACCTGACGGAACAGGGCGACACGAGCGGCGCTGTCGACAAGCTGACCACCTCGGCCGNNNNNNCTGGGTGA
PROTEIN sequence
Length: 399
MKSNVVSRSVFLDFLPRPGQAIANAAKGLVMIGMIATVAWATPAAANPKYSGIVIDAKTGKVLYSEDADDLRYPASLTKMMTLYLTFEALEARKIRLDSRVPFSKNASSEPPTKLGVGVGNSITVEQAILGLITRSANDASTALAELLGGSEERFTRIMTQKARALGMTRTVYRNANGLPNSAQVTTARDQARLGIALRQHFPQYYSYFSVRSFRLGKQVINGHNRLLGAVRGVDGIKTGYTRASGYNLVTSAMADGRSVVGVVMGGRSGAARDQQMRKLIATYMPKASRRGGGDLIAQTSDAPTLSAEVASSAATASVAGGFDLPENGPVPSYRYNESHLETAYATPASSSEVVGKRALAATLKLQRDAAVPQEDLTEQGDTSGAVDKLTTSAXXXG*