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SCNpilot_expt_1000_bf_scaffold_2803_curated_23

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: comp(16995..17606)

Top 3 Functional Annotations

Value Algorithm Source
GTP cyclohydrolase 1 {ECO:0000256|HAMAP-Rule:MF_00223, ECO:0000256|SAAS:SAAS00021192}; EC=3.5.4.16 {ECO:0000256|HAMAP-Rule:MF_00223, ECO:0000256|SAAS:SAAS00021179};; GTP cyclohydrolase I {ECO:0000256|HAMAP-Rule:MF_00223}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 95.6
  • Coverage: 203.0
  • Bit_score: 393
  • Evalue 2.50e-106
folE; GTP cyclohydrolase I (EC:3.5.4.16); K01495 GTP cyclohydrolase I [EC:3.5.4.16] similarity KEGG
DB: KEGG
  • Identity: 86.7
  • Coverage: 203.0
  • Bit_score: 365
  • Evalue 1.30e-98
  • rbh
GTP cyclohydrolase I n=1 Tax=Rhizobium RepID=UPI000365F4A8 similarity UNIREF
DB: UNIREF100
  • Identity: 86.7
  • Coverage: 203.0
  • Bit_score: 365
  • Evalue 3.10e-98
  • rbh

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 612
ATGGACGCCATAGTCACCAATTTTCCGCGCATCGAGGATGACGCCGGCCGCCCGACGCAGAAAGAGGCGGAAGACGCCGTTCGTGTCCTGCTCCGCTGGGCCGGCGACGATCCGCAGCGCGAGGGCCTGCTGGATACGCCTGCGCGCGTCGCCAAGGCCTATCGCGAGCTCTTCTCCGGCTATGACCTTGCCGCCGAGGACGTGCTCGGCCGCACCTTCGAGGAAGTCGCCGGCTATGACGACATGGTGCTGGTGAAGGACATTCCGTTCTTCTCGCATTGCGAGCACCATATGGTGCCGATCATCGGCAAGGCGCATGTCGCCTACCTTCCGAACGGCCGGGTGCTCGGTCTTTCCAAGATTGCCCGCGTGGTGGAGATCTTCGGCCGCCGCCTGCAGACGCAGGAGACGATGACGGCGCAGATCGCCAGGTCCATCGACGAAACGCTGAACCCGCGGGGCGTCGCCGTGATGATCGAGGCCGAGCATATGTGCATGGCCATGCGCGGCATCCAGAAACAGGGCTCGACAACGCTCACCACCACCTTTACCGGTGCCTTCAAGACCGAGCCGGCCGAACAGGTCCGGTTCATGACGATGATCCGGAGCTAG
PROTEIN sequence
Length: 204
MDAIVTNFPRIEDDAGRPTQKEAEDAVRVLLRWAGDDPQREGLLDTPARVAKAYRELFSGYDLAAEDVLGRTFEEVAGYDDMVLVKDIPFFSHCEHHMVPIIGKAHVAYLPNGRVLGLSKIARVVEIFGRRLQTQETMTAQIARSIDETLNPRGVAVMIEAEHMCMAMRGIQKQGSTTLTTTFTGAFKTEPAEQVRFMTMIRS*