ggKbase home page

SCNpilot_expt_1000_bf_scaffold_2803_curated_26

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: 18963..19496

Top 3 Functional Annotations

Value Algorithm Source
Uncharacterized protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5BXM0_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 70.9
  • Coverage: 175.0
  • Bit_score: 249
  • Evalue 2.80e-63
Uncharacterized protein {ECO:0000313|EMBL:EYR80971.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 70.9
  • Coverage: 175.0
  • Bit_score: 249
  • Evalue 3.90e-63
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 61.5
  • Coverage: 174.0
  • Bit_score: 205
  • Evalue 1.50e-50

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 534
GTGGAAACCTATGTCGCCCTCCTGCACTCCATCGTGCTTTCGCCCGGAAAGCGGGTGGTGATGGTGGACCTGAAGGCGATGGCCGAAGGCCTCGGCTTCCGCAACGCCCGCACGCTGGCCGCCACCGGCAACCTCGTCTTCGAGGGCGAGACCGCGCCGCTCGGCGAAATCGAGGCGCGGCTGGAAGCAGGCTTCCGCACGAGCTTCGGCAAGCATGTCGACATCATCGCCCGCACCGCCGAAGGCTGGAAGCGCCTTGCCGCCGCCAATCCCTTCCCGCAAGGCAACGGCGCCGACGTCGTGGTGCGCGCCATGCGCGTGCCGCTCGACGGGAAAGCGCTGGCAAGGCTCGAAAGCCACGCGACGCCCGGCATCCGCCTTGCCCTTTCGCACGGCGACCTCTGGATCGATTTTGCCGCAAAGCCGAGTGAGACGAAGCTGCTCGCGCACCTGACGACGAAGAAGCTCGGCATCGGCACGCTGCGCAACGCCAACACGGTCAACGGCCTAGCCGCGATGCTCGGCCGATCATAA
PROTEIN sequence
Length: 178
VETYVALLHSIVLSPGKRVVMVDLKAMAEGLGFRNARTLAATGNLVFEGETAPLGEIEARLEAGFRTSFGKHVDIIARTAEGWKRLAAANPFPQGNGADVVVRAMRVPLDGKALARLESHATPGIRLALSHGDLWIDFAAKPSETKLLAHLTTKKLGIGTLRNANTVNGLAAMLGRS*