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SCNpilot_expt_1000_bf_scaffold_7933_curated_14

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: comp(10797..11732)

Top 3 Functional Annotations

Value Algorithm Source
Tyrosine recombinase XerC {ECO:0000256|HAMAP-Rule:MF_01808}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 92.0
  • Coverage: 311.0
  • Bit_score: 564
  • Evalue 1.30e-157
tyrosine recombinase XerC n=1 Tax=Rhizobium giardinii RepID=UPI0003669F45 similarity UNIREF
DB: UNIREF100
  • Identity: 81.7
  • Coverage: 311.0
  • Bit_score: 501
  • Evalue 7.10e-139
  • rbh
xerC; Putative tyrosine recombinase similarity KEGG
DB: KEGG
  • Identity: 80.4
  • Coverage: 311.0
  • Bit_score: 488
  • Evalue 1.20e-135
  • rbh

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 936
ATGACAGAACTTATCATCATCGCCGATCCGGCGCTCATGGCCGAGCGGCAGGGCTGGCTTGCCGGGCTTGCCGAGGAGCGCCGGCTTTCCGGCAACACGCTGGAAGCCTACGAGCGCGACACGCGCCAGTTCCTCGCCTTCCTCACCGGCCATCTCGCCGCTCCTGCCCGCCTCAAGGACATCGGGGCCCTGCGCCCGGCGGACCTGCGCGGCTTCCTCGCCGCCCGCCGCCGCGACGGCGCGGGAGCCCGCACCCTCGGCCGCGGCCTTGCGGGCCTGCGCTCCTTCCTGCGCCACCTCGAACGCAAGGGGCTTGCCAATGCGGCGGGCGCTGCCGCCGTGCGCTCGCCGAAGCAGCCGAAATCCCTGCCCAAGCCGCTTTCGGACCGGCAGGCCATCGCCGTCGTCGATGCCCGTGAGCAACTGGCCGAAGAACCCTGGATCCGCGTGCGCAACGCCGCGGTCCTCGCCCTCCTCTATGGCTGCGGCCTGCGCATCTCCGAGGCCCTGTCGCTGACCCCGGCCGATTTTTCCGGCAGCCCCACGTCGCTCCGCATCGCCGGCAAGGGCGGCAAGATGCGCATCGTGCCGCTCATCGCGCCGGCCCGCACGGGCGTCGAGGACTATATCAAGCTCTGCCCCTTCCCCCTCCCGGACGACGGGCCGCTCTTCCGCGGCGCGCGCGGCGGACCGCTGCAGCCCGCCATCATCCAGCGCGAGATGCAGAAGCTGCGCGGTGCGCTCGGCCTGCCGGACAGCGCGACGCCCCATGCGCTGCGCCACTCCTTCGCCACGCATCTGCTGGCCGGCGGCGGGGATCTGCGCACCATCCAGGAACTGCTCGGCCACGCCAGCCTTTCCACCACGCAGGTCTATACCGGCGTCGATTCGGCGCGCCTTCTCGAAATCTACGACCGCGCCCATCCCCGCGCCTGA
PROTEIN sequence
Length: 312
MTELIIIADPALMAERQGWLAGLAEERRLSGNTLEAYERDTRQFLAFLTGHLAAPARLKDIGALRPADLRGFLAARRRDGAGARTLGRGLAGLRSFLRHLERKGLANAAGAAAVRSPKQPKSLPKPLSDRQAIAVVDAREQLAEEPWIRVRNAAVLALLYGCGLRISEALSLTPADFSGSPTSLRIAGKGGKMRIVPLIAPARTGVEDYIKLCPFPLPDDGPLFRGARGGPLQPAIIQREMQKLRGALGLPDSATPHALRHSFATHLLAGGGDLRTIQELLGHASLSTTQVYTGVDSARLLEIYDRAHPRA*