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SCNpilot_expt_1000_bf_scaffold_11016_curated_6

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: comp(3806..4783)

Top 3 Functional Annotations

Value Algorithm Source
Lipoyl synthase n=1 Tax=Shinella zoogloeoides DD12 RepID=V5D550_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 95.4
  • Coverage: 325.0
  • Bit_score: 627
  • Evalue 6.90e-177
  • rbh
Lipoyl synthase {ECO:0000256|HAMAP-Rule:MF_00206}; EC=2.8.1.8 {ECO:0000256|HAMAP-Rule:MF_00206};; Lip-syn {ECO:0000256|HAMAP-Rule:MF_00206}; Lipoate synthase {ECO:0000256|HAMAP-Rule:MF_00206}; Lipoic acid synthase {ECO:0000256|HAMAP-Rule:MF_00206}; Sulfur insertion protein LipA {ECO:0000256|HAMAP-Rule:MF_00206}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 95.4
  • Coverage: 325.0
  • Bit_score: 627
  • Evalue 9.70e-177
lipA; lipoic acid synthetase (EC:2.8.1.-); K03644 lipoic acid synthetase [EC:2.8.1.8] similarity KEGG
DB: KEGG
  • Identity: 93.5
  • Coverage: 325.0
  • Bit_score: 617
  • Evalue 2.20e-174
  • rbh

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 978
ATGGTCACCATTCTCGACCGCACCAATCTCGACCCCGAAGCCAAGCGGGTGCGCCATCCGGAAAAGGCCAACCGGCCGGACACGGAAGTGCTGCGCAAGCCGGAATGGATCCGCGTCAAGGCGCCGGTCTCCAAGGGCTATCAGGAGACGCGCGATCTGGTGCGCTCCCACAAGCTGGTCACGGTCTGCGAGGAGGCGGGCTGCCCGAATATCGGCGAGTGCTGGGACAAGAAGCACGCCACCTTCATGATCATGGGCGAGATCTGTACCCGCGCCTGCGCCTTCTGCAACGTGGCGACGGGCAAGCCCAATGCACTCGACATGGAAGAGCCGGAAAACGTCGCCAAGGCCGTCCGGCAGATGGGCCTGTCGCACGTCGTCATCACCTCGGTGGACCGTGACGATCTGGAAGACGGCGGCGCCGAGCATTTCGAGAAGGTGATCTTCGCGATCCGCGCCGCGTCCCCCGCAACGACCATCGAAATCCTGACGCCGGACTTCCTGAAGAAGCCGGGCGCGCTGGAGCGCGTGGTCGCCGCCAAGCCCGACGTCTTCAACCACAACATGGAGACCGTACCGGGCAATTACCTGACGGTGCGTCCCGGCGCGCGCTATTTCCACTCCGTCCGCCTGTTGCAGCGCGTGAAGGAACTGGACCCGACCATGTTCACCAAGTCGGGCATCATGGTGGGCCTCGGCGAGGAGCGCAACGAGGTGCTCCAGCTCATGGACGACCTCAGGACCGCCGACGTCGACTTCCTGACGATCGGCCAGTATCTCCAGCCGACCCGCAAGCACCACAAGGTCGACCGCTTCGTGACGCCGGAGGAGTTCAAGTCCTACGAGACCGTTGCCTACACCAAGGGCTTCCTGATGGTCTCCTCCAGCCCGCTGACGCGTTCCTCGCACCATGCCGGCGACGACTTCGCCCGCCTGCGCGCCGCCCGCGAGCGCAAGCTTCTCGCTGCAGCGGAATAG
PROTEIN sequence
Length: 326
MVTILDRTNLDPEAKRVRHPEKANRPDTEVLRKPEWIRVKAPVSKGYQETRDLVRSHKLVTVCEEAGCPNIGECWDKKHATFMIMGEICTRACAFCNVATGKPNALDMEEPENVAKAVRQMGLSHVVITSVDRDDLEDGGAEHFEKVIFAIRAASPATTIEILTPDFLKKPGALERVVAAKPDVFNHNMETVPGNYLTVRPGARYFHSVRLLQRVKELDPTMFTKSGIMVGLGEERNEVLQLMDDLRTADVDFLTIGQYLQPTRKHHKVDRFVTPEEFKSYETVAYTKGFLMVSSSPLTRSSHHAGDDFARLRAARERKLLAAAE*