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SCNpilot_expt_1000_bf_scaffold_11016_curated_7

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: comp(5010..6455)

Top 3 Functional Annotations

Value Algorithm Source
Dihydrolipoyl dehydrogenase LpdA n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CW74_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 93.1
  • Coverage: 481.0
  • Bit_score: 899
  • Evalue 1.40e-258
  • rbh
Dihydrolipoyl dehydrogenase {ECO:0000256|RuleBase:RU003692}; EC=1.8.1.4 {ECO:0000256|RuleBase:RU003692};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 93.1
  • Coverage: 481.0
  • Bit_score: 899
  • Evalue 2.00e-258
lpdA; dihydrolipoyl dehydrogenase (EC:1.8.1.4) similarity KEGG
DB: KEGG
  • Identity: 87.1
  • Coverage: 481.0
  • Bit_score: 849
  • Evalue 4.00e-244
  • rbh

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1446
ATGTCGAATGCCTACGACGTCATCATCATCGGCTCCGGCCCCGGCGGCTATATCGCGGCGATCCGCGCCGCCCAGCTCGGCCTGAAGACGGCCATCGTCGAGCGCGAGCACCTCGCCGGCATCTGCTCCAACTGGGGCTGCATCCCGACCAAGGCGCTGCTGCGCTCGGCGGAGATCTTCCACTACGCGCAGCATCCGGGCGATTACGGCGTGAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCGCGCGGCATCGCCCAGCGCATGAATGCCGGCGTCGGCTTCCTGATGAAGAAGAACAAGGTCGACATCATCTGGGGCGAGGCGAAGCTGACGAAGCCCGGCGAGATCGTGGTGTCCAGGACGACCAAGGCGATCCAGCAGCCGCAGGCACCGCTGCCGAAGACCGTTCTGCCCGAAGGCACCTACACCGCCAAGCACATCGTCATCGCCACCGGCGCGCGCCCGCGCGCCCTGCCGGGCATCGAGCCTGATGGCAAGCTGATCTGGACCTATTTCGAGGCGATGAAGCCTGAGGCGATGCCGAAGTCGCTGCTCGTCATGGGCTCGGGCGCCATCGGCATCGAGTTCGCCTCCTTCTACCGCACGCTCGGCGTCGAGGTGACGGTCGTCGAGGTGATGAAGACGGTGATGCCGGTCGAGGACGCGGAGATCTCGGCGCTCGCCAAGAAGCAGTTCGAGAAGCAGGGCATGAAGATCCATCTGGAGGCCAAGGTCGCCAGGGTGGAGAAGGGCGCCAATTCCATCACCGCCCATGTCGAGATGAAGGACGGCAAGGTCGAGAAGATCACCGCCGACCGGATGATCTCCGCCGTCGGCGTGCAGGCGAACATCGAGACGATCGGCCTTGAGGCGCTCGGCGTGAAGACCGACCGCGGCTTCATCGCCATCGACGGCTACGGCAGGACGAACGTTCCCGGCCTCTACGCCATCGGCGACGTCGCCGGTCCCCCGATGCTCGCCCACAAGGCCGAGCACGAGGCCGTCATCTGCATCGAGAAGATCGCCGGCCTGCCGAACGTCCACCCGATGGACAAGTCGAAGATCCCCGGCTGCACCTACTGCCACCCGCAGGTCGCCTCGGTGGGCCTGACGGAAGCCAAGGCCAAGGAGCAGGGCCGCGACATCCGCGTCGGCCGCTTCCCCTTCGTCGCCAACGGCAAGGCCATCGCGCTGGGCGAGGACCAGGGCCTCGTCAAGACGATCTTCGACAGGAAGACCGGCGAACTGCTCGGCGCCCACCTCGTCGGCGCGGAAGTGACCGAACTCATCCAGGGCTTCGTCATCGCCATGAACCTGGAGACGACGGAGGAGGAACTGATGCACACGATCTTCCCGCACCCGACGATCTCCGAGACGCTGAAGGAAAGCGTGCTGGATGCCTATGGGCGTGCATTGAACGCCTGA
PROTEIN sequence
Length: 482
MSNAYDVIIIGSGPGGYIAAIRAAQLGLKTAIVEREHLAGICSNWGCIPTKALLRSAEIFHYAQHPGDYGVXXXXXXXXXXXXXXXXSRGIAQRMNAGVGFLMKKNKVDIIWGEAKLTKPGEIVVSRTTKAIQQPQAPLPKTVLPEGTYTAKHIVIATGARPRALPGIEPDGKLIWTYFEAMKPEAMPKSLLVMGSGAIGIEFASFYRTLGVEVTVVEVMKTVMPVEDAEISALAKKQFEKQGMKIHLEAKVARVEKGANSITAHVEMKDGKVEKITADRMISAVGVQANIETIGLEALGVKTDRGFIAIDGYGRTNVPGLYAIGDVAGPPMLAHKAEHEAVICIEKIAGLPNVHPMDKSKIPGCTYCHPQVASVGLTEAKAKEQGRDIRVGRFPFVANGKAIALGEDQGLVKTIFDRKTGELLGAHLVGAEVTELIQGFVIAMNLETTEEELMHTIFPHPTISETLKESVLDAYGRALNA*