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SCNpilot_expt_1000_bf_scaffold_14632_curated_1

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: 1..234

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, AsnC family n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CP59_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 92.2
  • Coverage: 77.0
  • Bit_score: 140
  • Evalue 8.00e-31
Transcriptional regulator, AsnC family {ECO:0000313|EMBL:EYR81782.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 92.2
  • Coverage: 77.0
  • Bit_score: 140
  • Evalue 1.10e-30
AsnC family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 63.2
  • Coverage: 76.0
  • Bit_score: 101
  • Evalue 1.70e-19

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 234
GCCGTGCGCGCCATCATGATGATCGAGATCACCGGCCAGAAGACGCTGGCCGCGATCAAGGCGCTGCGCGGCATTCCGGAGGTGCGGGCGCTCCACACCACGAATGGCGCGTGGGACCTCGTCGCGGAAATCCAGACGGAGAACCTCGTCGAGTTCGAGCGGGTCTTGCGCGGCATCCGCGCCATGGACGGCGTCTCGAAATCCGAAACGAGCCTGCTGCTGACCACACTCTGA
PROTEIN sequence
Length: 78
AVRAIMMIEITGQKTLAAIKALRGIPEVRALHTTNGAWDLVAEIQTENLVEFERVLRGIRAMDGVSKSETSLLLTTL*