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SCNpilot_expt_1000_bf_scaffold_14632_curated_4

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: comp(2792..3169)

Top 3 Functional Annotations

Value Algorithm Source
Polysaccharide deacetylase {ECO:0000313|EMBL:KKC38315.1}; TaxID=1293439 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia epidermidihirudinis.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 61.0
  • Coverage: 118.0
  • Bit_score: 153
  • Evalue 2.70e-34
Lipoprotein n=1 Tax=Brucella inopinata BO1 RepID=E0DP37_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 60.5
  • Coverage: 119.0
  • Bit_score: 142
  • Evalue 2.60e-31
polysaccharide deacetylase similarity KEGG
DB: KEGG
  • Identity: 59.7
  • Coverage: 119.0
  • Bit_score: 140
  • Evalue 4.10e-31

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Taxonomy

Devosia epidermidihirudinis → Devosia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 378
GTGCCGGCCGGCACGGCGGCCGCGGTGGCGGAGGAGGTGCGCGGCGGCGCCGAAGCGATCGCCCGCGCGTTCGGTACAAGCCCGAAATGGTATCGCGACGCGACCGCACTCTACAGCCCCGACGCCATGGCCTTGATCGGCTCGATGGGCTTCCGCATCGCGGGCTTCTCGCTCAACGGCGATTTCGGCGCAAGCGCATCCGCGAGGATGGCGCACAAGCGCATTGCCGGCGCGAAAAGCGGCGACATCGTCATCTCGCACATCAACCAGCCGCACCGGCCGGCCGGCGCGGGCGTGATCTCGGGCATCCTCGCGCTCAAGGCCCGCGGCTTCAGCTTCGTGCATCTCGACGACGTCGCGACCATGGCGGTCGGCTAG
PROTEIN sequence
Length: 126
VPAGTAAAVAEEVRGGAEAIARAFGTSPKWYRDATALYSPDAMALIGSMGFRIAGFSLNGDFGASASARMAHKRIAGAKSGDIVISHINQPHRPAGAGVISGILALKARGFSFVHLDDVATMAVG*