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SCNpilot_expt_1000_bf_scaffold_5456_curated_9

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: comp(8762..8941)

Top 3 Functional Annotations

Value Algorithm Source
PAS domain S-box n=1 Tax=Rhizobium sp. CF080 RepID=J2T1T7_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 78.6
  • Coverage: 56.0
  • Bit_score: 98
  • Evalue 2.70e-18
Multi-sensor hybrid histidine kinase {ECO:0000313|EMBL:EUB98304.1}; TaxID=1144310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF080.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 78.6
  • Coverage: 56.0
  • Bit_score: 98
  • Evalue 3.80e-18
PAS/PAC sensor hybrid histidine kinase response regulator protein (EC:2.7.3.-) similarity KEGG
DB: KEGG
  • Identity: 77.6
  • Coverage: 58.0
  • Bit_score: 96
  • Evalue 2.50e-18

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Taxonomy

Rhizobium sp. CF080 → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 180
CTTGCCGATGTCGTCCGGGGAAAAAGGCCCGATCTCAACGTGCTTTTCGTCACGGGATATGCGGAGAACGCCGTGCTCAACCACGGTCATCTCGAGCGTGGCATGCAGGTCGTCACGAAACCGTTCACCGCTGAAACGCTCGCGCGGCGCGTGAAGGATTTGATCGGCGGTGAAGCGTAG
PROTEIN sequence
Length: 60
LADVVRGKRPDLNVLFVTGYAENAVLNHGHLERGMQVVTKPFTAETLARRVKDLIGGEA*