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SCNpilot_expt_1000_bf_scaffold_17105_curated_2

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: comp(765..1421)

Top 3 Functional Annotations

Value Algorithm Source
Pyruvate/2-oxoglutarate dehydrogenase complex E1 component {ECO:0000313|EMBL:EYR80045.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 94.5
  • Coverage: 218.0
  • Bit_score: 418
  • Evalue 4.60e-114
pdhB; pyruvate dehydrogenase E1 component subunit beta; K00162 pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1] similarity KEGG
DB: KEGG
  • Identity: 94.0
  • Coverage: 218.0
  • Bit_score: 414
  • Evalue 2.50e-113
  • rbh
Pyruvate dehydrogenase E1 component beta subunit n=1 Tax=Rhizobium sp. (strain NGR234) RepID=C3MBK2_RHISN similarity UNIREF
DB: UNIREF100
  • Identity: 94.0
  • Coverage: 218.0
  • Bit_score: 414
  • Evalue 8.10e-113
  • rbh

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 657
ATGGGCGCGCCGATCGTCTTCCGCGGCCCGAGCGGCGCTGCGGCGCGCGTGGCTGCGCAGCACTCCCAGTGCTATGCCGCCTGGTACAGCCACATTCCGGGCCTCAAGGTCGTCATGCCCTATACGGCGGCCGACGCGAAGGGCCTCCTGAAGGCCGCCATCCGCGATCCGAACCCGATCATCTTCCTCGAGAACGAGATTCTCTACGGCCAGAGCTTCGAAGTGCCGAAGCTGGATGATTTCGTGCTGCCGATCGGCAAGGCGCGCATCCACAAGAAGGGCAACGACGCGACGGTCGTCTCCTTCGGCATCGGCATGACCTACGCGGTCAAGGCTGTCGCCGAGCTGGAGAAGGAAGGCATCGACGTCGAACTGATCGATCTTCGCACCATCCGCCCGATGGACCTGCCGACCGTCATCGAATCGGTCAGGAAGACCGGCCGCCTCGTCACCGTGGAGGAGGGCTACCCGCAGTCTTCCGTCGGCACCGAGATCGCAACCCGCGTCATGCAGCAGGCCTTCGACTATCTCGACGCGCCGATCCTGACGATCGCCGGCAAGGACGTCCCGATGCCCTATGCCGCGAATCTCGAAAAGCTCGCGCTGCCGAATGTCGGCGAAGTCGTCCAGGCGGTGAAGGCCGTCTGCTACAAGTAA
PROTEIN sequence
Length: 219
MGAPIVFRGPSGAAARVAAQHSQCYAAWYSHIPGLKVVMPYTAADAKGLLKAAIRDPNPIIFLENEILYGQSFEVPKLDDFVLPIGKARIHKKGNDATVVSFGIGMTYAVKAVAELEKEGIDVELIDLRTIRPMDLPTVIESVRKTGRLVTVEEGYPQSSVGTEIATRVMQQAFDYLDAPILTIAGKDVPMPYAANLEKLALPNVGEVVQAVKAVCYK*