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SCNpilot_expt_1000_bf_scaffold_17105_curated_4

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: comp(2185..2673)

Top 3 Functional Annotations

Value Algorithm Source
pdhA2; pyruvate dehydrogenase E1 component subunit alpha (EC:1.2.4.1) similarity KEGG
DB: KEGG
  • Identity: 95.1
  • Coverage: 162.0
  • Bit_score: 314
  • Evalue 2.00e-83
  • rbh
Pyruvate dehydrogenase E1 component subunit alpha n=1 Tax=Sinorhizobium fredii USDA 257 RepID=I3X834_RHIFR similarity UNIREF
DB: UNIREF100
  • Identity: 95.1
  • Coverage: 162.0
  • Bit_score: 314
  • Evalue 6.50e-83
  • rbh
Pyruvate dehydrogenase E1 component subunit alpha {ECO:0000256|RuleBase:RU361139}; EC=1.2.4.1 {ECO:0000256|RuleBase:RU361139};; TaxID=1185652 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium fredii USDA 257.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 95.1
  • Coverage: 162.0
  • Bit_score: 314
  • Evalue 9.10e-83

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Taxonomy

Sinorhizobium fredii → Sinorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 489
ATGGCGGCCCTCTGGAAGCTGCCGGTCATCTACATCATCGAGAACAACCGCTACGCCATGGGCACCGCCGTCTCGCGCGCCTCGGCCCAGACGGACTTCTCCCAGCGTGGCGCCTCCTTCGGCATTCCGGGCTACCAGGTCGACGGCATGGACGTGCGCGCGGTGAAGGCCGCCGCGGACGAGGCCGTCGAGCACTGCCGCTCCGGCAAGGGCCCGATCATCCTCGAAATGCTGACCTACCGCTACCGCGGCCACTCCATGTCGGACCCCGCCAAGTATCGCTCGAAGGACGAAGTGCAGAAGATGCGCTCGGAGCACGACCCGATCGAGCAGGTCCGCGCGCGTCTTCTCGAAAGGAAGTGGGCGAGCGAAGACGATCTCAAGCAGATCGACAAGGACGTCCGTGACATCGTCGCCGACAGCGCCGATTTCGCGCAGTCCGATCCGGAGCCGGATGTCTCCGAACTCTACACCGACATCCTGCTGTAA
PROTEIN sequence
Length: 163
MAALWKLPVIYIIENNRYAMGTAVSRASAQTDFSQRGASFGIPGYQVDGMDVRAVKAAADEAVEHCRSGKGPIILEMLTYRYRGHSMSDPAKYRSKDEVQKMRSEHDPIEQVRARLLERKWASEDDLKQIDKDVRDIVADSADFAQSDPEPDVSELYTDILL*