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SCNpilot_expt_1000_bf_scaffold_17105_curated_9

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: 7011..8345

Top 3 Functional Annotations

Value Algorithm Source
Glycine/D-amino acid oxidase {ECO:0000313|EMBL:EYR81314.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 76.6
  • Coverage: 415.0
  • Bit_score: 626
  • Evalue 3.80e-176
FAD dependent oxidoreductase (EC:1.-.-.-) similarity KEGG
DB: KEGG
  • Identity: 61.5
  • Coverage: 408.0
  • Bit_score: 491
  • Evalue 2.50e-136
  • rbh
FAD dependent oxidoreductase n=1 Tax=Agrobacterium sp. (strain H13-3) RepID=F0LEG3_AGRSH similarity UNIREF
DB: UNIREF100
  • Identity: 61.5
  • Coverage: 408.0
  • Bit_score: 491
  • Evalue 8.10e-136
  • rbh

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1335
ATGCTTTCGGCCCGCAATGCAAGCATCGGCACCACGCGCGGCAGCCGTGCGGAACTTTTCCGCATGTCCGCCATTAGAGACGACCTTCCCGCACGGAGCAGTCCCATTCCGACATCCCGAGAGATCACCCGCCAGCGCGACCTGCACGAATCCCGGCCACTGTGGGCCGACTCGCCGCGCATTTCGCTGCGCACGCGGCGCAGCCCCCAGCGGCAGGACTACGATTGCATCATCGTCGGCGCCGGCATTTCGGGCGCCCTCGCGGCCCATGCGCTCGCCGACGGCAAGCGTTCCGTGCTCGTCGTGGACCGCCGGGAGCCCGTTCATGGCAGCACGCTCGCCAGCACGGCGATGATCCAGCACGAGATCGACGTTCCCCTGCACAGGCTCGCCGGCATGATCGGCGTGGACAAGGCGCAGCGCGCCTGGCAGCGTTCCGCCCGCGCCGTCGAGCAATTGACGCGCATCGTCGCGGATGCAGGCCTTTCCTGCGGCTTCGAGCGCAAGAAGACCCTCTTCCTTGCCGGCGACGCCTATGGCCGGCGGGCCTTGCAGACCGAATTGGAGGCACGCCAGGCGGCAGGCATCGAAGCGGAACTCGTCGATGCCGCACGGCTCGCCGAGCGCTTTTCCATCGACCGCACCGGCGCCCTTCTCAGCGACATCTCGGCCTCCGCCAACCCGGCGCAGATGGCCGCCGGCATCCTGCGGGCGGCGGCGGCGCGCGGCGTCGAGATCGTCAGCCCCCTGGAGATCACCGACATGCGGGCGACGACCGACTGCGTGTTCCTCGCCACGGCCGAGGGCAACATCGTCTCCGCCAGGCATGTCGTGTTCTGCTCCGGCTACGAGTTCCTCGAAGCGGTCGCCGACCGGGATCACGCCATCGTCTCCACCTGGGCGCTCTCGACGCCGCCCGGCACGGCGCTGCCGGACTGGCTGAAGGACTGCATCGTCTGGGAGGGCGCCGATCCCTATCTCTACCTGCGCCGCTCCCGCGACGGCCGGCTGATCGCGGGCGGCGAGGACGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGACCATCCATCGCAAGGTCGAGGCCCTGCTCGGACTTTCCCTGCCTGAGCCGGATCATGTCTGGGCCGCCCCCTTCGGCACCACCCGCACCGGCCTGCCGCTCATCGGCCGCGTTCCCGGCCTGCCGAACGTCTTCGCGGTGATGGGTTTCGGCGGCAACGGTATCACCTTCAGCCAGATCGCGGCCGAGATCGTCGCGGCTGATATTGCCGGTCATGGCGATGCGGATGCCGATCTTTTCGCCTTCCGCGCCCGCGATTCCTGA
PROTEIN sequence
Length: 445
MLSARNASIGTTRGSRAELFRMSAIRDDLPARSSPIPTSREITRQRDLHESRPLWADSPRISLRTRRSPQRQDYDCIIVGAGISGALAAHALADGKRSVLVVDRREPVHGSTLASTAMIQHEIDVPLHRLAGMIGVDKAQRAWQRSARAVEQLTRIVADAGLSCGFERKKTLFLAGDAYGRRALQTELEARQAAGIEAELVDAARLAERFSIDRTGALLSDISASANPAQMAAGILRAAAARGVEIVSPLEITDMRATTDCVFLATAEGNIVSARHVVFCSGYEFLEAVADRDHAIVSTWALSTPPGTALPDWLKDCIVWEGADPYLYLRRSRDGRLIAGGEDXXXXXXXXXXXXXXTIHRKVEALLGLSLPEPDHVWAAPFGTTRTGLPLIGRVPGLPNVFAVMGFGGNGITFSQIAAEIVAADIAGHGDADADLFAFRARDS*