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SCNpilot_expt_1000_bf_scaffold_10460_curated_2

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: 481..1365

Top 3 Functional Annotations

Value Algorithm Source
4-hydroxy-tetrahydrodipicolinate synthase n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CUH0_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 90.5
  • Coverage: 294.0
  • Bit_score: 541
  • Evalue 4.50e-151
  • rbh
4-hydroxy-tetrahydrodipicolinate synthase {ECO:0000256|HAMAP-Rule:MF_00418, ECO:0000256|SAAS:SAAS00086421}; Short=HTPA synthase {ECO:0000256|HAMAP-Rule:MF_00418};; EC=4.3.3.7 {ECO:0000256|HAMAP-Rule:MF_00418, ECO:0000256|SAAS:SAAS00086421};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 90.5
  • Coverage: 294.0
  • Bit_score: 541
  • Evalue 6.30e-151
dihydrodipicolinate synthase; K01714 dihydrodipicolinate synthase [EC:4.2.1.52] similarity KEGG
DB: KEGG
  • Identity: 86.1
  • Coverage: 294.0
  • Bit_score: 513
  • Evalue 5.40e-143
  • rbh

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 885
ATGTTCAAGGGATCCATTCCCGCTCTCGTCACACCCTTCACGGCGGCCGGCGCCGTCGATGAGGATGCCTTTGCCGCGCATGTGGAATGGCAGATCGGCGAAGGCAGCCACGGCCTCGTGCCGGTCGGCACCACGGGCGAATCGCCGACGCTGTCGCATGACGTGCACAAACGGGTGGTGGAACTCTGCATCAAGGTGGCCGCAGGCCGCGTTCCGGTGATCGCCGGCGCGGGCTCCAACAACACCAGGGAAGCGATCGATCTCGCCCAGCACGCCGAGAAGGCGGGGGCGGATGCGATCCTCGTCGTCACGCCCTATTACAACAAGCCGACGCAGAAGGGCCTCTTCGCGCATTTCTCGGCCATCGCCGAAGCCGTGAAGCTGCCGATCGTCATCTACAACATTCCGGGCCGCTCGGTGGTCGACATGACGCCCGAGACGATGGGCGCGCTGCACAAGGCGCATCCTTCGATCGTCGGCGTCAAGGATGCGACGGGCAAGATCGAGCGCGTCTCCGAGCAGCGCATCGCCTGCGGCAGGGATTTCGTCCAGCTCTCGGGCGAGGATGCCACGGCGCTCGGCTTCAACGCCCATGGCGGCGTCGGCTGCATCTCTGTCACGGCCAATGTCGCCCCGCGGCTGTGCGCCGAGTTCCAGAAGGCGACGCTTGCCGGCGATTATGCCAAGGCGCTGGAATACCAGGACAGGCTGATGCCGCTGCACAAGGCGATCTTCCTGGAGCCGGGCGTGTGCGGCGCGAAATACGGCCTTTCCCGCGTGCGCGGTATGAGCCGCGCGGTTCGCTCCCCGCTCATGTCCGCGCTGGAGCCGGCGACGGAGGCGGCGATCGACGCGGCGCTCCGCCACGCCGGCCTGCTGAACTGA
PROTEIN sequence
Length: 295
MFKGSIPALVTPFTAAGAVDEDAFAAHVEWQIGEGSHGLVPVGTTGESPTLSHDVHKRVVELCIKVAAGRVPVIAGAGSNNTREAIDLAQHAEKAGADAILVVTPYYNKPTQKGLFAHFSAIAEAVKLPIVIYNIPGRSVVDMTPETMGALHKAHPSIVGVKDATGKIERVSEQRIACGRDFVQLSGEDATALGFNAHGGVGCISVTANVAPRLCAEFQKATLAGDYAKALEYQDRLMPLHKAIFLEPGVCGAKYGLSRVRGMSRAVRSPLMSALEPATEAAIDAALRHAGLLN*