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SCNpilot_expt_1000_bf_scaffold_10460_curated_3

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: 1367..1846

Top 3 Functional Annotations

Value Algorithm Source
SsrA-binding protein SmpB n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CZ29_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 94.3
  • Coverage: 159.0
  • Bit_score: 305
  • Evalue 3.90e-80
  • rbh
SsrA-binding protein {ECO:0000256|HAMAP-Rule:MF_00023, ECO:0000256|SAAS:SAAS00023472}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 94.3
  • Coverage: 159.0
  • Bit_score: 305
  • Evalue 5.40e-80
smpB; SsrA-binding protein SmpB similarity KEGG
DB: KEGG
  • Identity: 85.5
  • Coverage: 159.0
  • Bit_score: 278
  • Evalue 1.60e-72

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 480
ATGGTGACGAAAGCGCGTCCGACAACGGTCAAGAAGATTGTCGCGGAGAACCGGAAGGCCCGCTACAACTACGAGATCCTGGATACCTACGAGGCCGGTCTGGTGCTGACCGGCACGGAGGTCAAGTCGCTACGCGAGGGCAAGGCGAATATCGCCGAATCCTATGCCTCCGACGAGGACGGCGAACTCTGGCTGATCAATTCCTACCTGCCGGAATACCTGCAGGCGAACCGCTTCAACCACGAAACGCGCCGGCGGCGCAAGCTCCTGCTGTCGCGCCGCGAGATCCATCGCCTGCGCGTCGCGATCAATCGCGAGGGCATGACCCTCGTGCCGTTGAAAATCTATTTCAACGATAGAGGCCGGGCCAAGCTCGAACTCGCGCTTGCCAAGGGCAAGAAGCTGCACGACAAGCGCGAGACGGAGAAGGAACGCGACTGGAACCGCCAGAAAGGCCGCCTGCTGCGCGAGCGCGGCTAG
PROTEIN sequence
Length: 160
MVTKARPTTVKKIVAENRKARYNYEILDTYEAGLVLTGTEVKSLREGKANIAESYASDEDGELWLINSYLPEYLQANRFNHETRRRRKLLLSRREIHRLRVAINREGMTLVPLKIYFNDRGRAKLELALAKGKKLHDKRETEKERDWNRQKGRLLRERG*