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SCNpilot_expt_1000_bf_scaffold_10460_curated_4

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: 2319..2687

Top 3 Functional Annotations

Value Algorithm Source
Transposase DDE domain protein {ECO:0000313|EMBL:CEJ15827.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 82.7
  • Coverage: 110.0
  • Bit_score: 198
  • Evalue 5.50e-48
Transposase n=1 Tax=Sphingobium ummariense RL-3 RepID=T0K473_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 65.6
  • Coverage: 122.0
  • Bit_score: 166
  • Evalue 2.10e-38
transposase, IS4 similarity KEGG
DB: KEGG
  • Identity: 64.5
  • Coverage: 121.0
  • Bit_score: 160
  • Evalue 4.80e-37

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Taxonomy

bacterium YEK0313 → Bacteria

Sequences

DNA sequence
Length: 369
ATGGTCTGCGACACGCTCGGCCGGCCGCTGCGCTTCATGCTCACCGCCGGCCAGCGACACGACAACCTGACCGCAAAGTCGCTGCTCGACGGCTTCCAGGCAGAAGCCGTGCTGGCCGACCGGGCCTATGACAACAACGACTTGCGCCAGACCATCGCCGACATGAACGCCGAGGCGGTCATCCCCTCGACACGCTCCCGCAAGGTCCCCATCCCGCACGACACGACCATCTACAGGCTCCGCAACCGCATCGAGCGCTGCTTCAACAGGCTCAAGCACTTCAAACGCTTCGCCACACGATACGACCGACGAGCCGAATACTTCCTCGCCTTCGTCCATATCGCAGCTATCGCCATATGGCTCCGCTGA
PROTEIN sequence
Length: 123
MVCDTLGRPLRFMLTAGQRHDNLTAKSLLDGFQAEAVLADRAYDNNDLRQTIADMNAEAVIPSTRSRKVPIPHDTTIYRLRNRIERCFNRLKHFKRFATRYDRRAEYFLAFVHIAAIAIWLR*