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SCNpilot_expt_1000_bf_scaffold_13353_curated_2

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: 1065..1505

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator MarR family n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CRA3_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 90.3
  • Coverage: 145.0
  • Bit_score: 260
  • Evalue 1.00e-66
Transcriptional regulator MarR family {ECO:0000313|EMBL:EYR80283.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 90.3
  • Coverage: 145.0
  • Bit_score: 260
  • Evalue 1.40e-66
putative transcriptional regulator, MarR family similarity KEGG
DB: KEGG
  • Identity: 67.6
  • Coverage: 142.0
  • Bit_score: 194
  • Evalue 2.80e-47

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 441
ATGGATTTCGACCGGAAGGAGTCGGCAGCATACCTCGCCAATCTCCTGGCGAAGGCGGCGTCCCGCGCCCTTCATGCGCGGGCGGACGGGGCCGGCTTTGCGCCCGGCCAGTTCCCGGTCCTGCTCGAATTGTGGGGCGGCGACGGCCTCACCCAGCGCGAGCTCCTCGACCGGCTCGACATCGAGCAGGCGACGATGGCCAACACGCTGTCGCGCATGGAGCGCGACGGGCTGATCTTGCGCCGCCGGCACCCGAAGGACCGGCGGGCGCAGCTCGTCTTCCTGACGACGCGCGGCAAGGCGCTGCGCGAGACCGCGATGGCCGCCGCCTGCGCCACCGAGGAGGCGCTGTTCCGGGGCTTCCGCCGCTTCGAACGGGAGCTGCTTCTCGAATACATGCGCATGGTGCTCGCCAATCTCGGCCGCGATCCGCGCGCCTGA
PROTEIN sequence
Length: 147
MDFDRKESAAYLANLLAKAASRALHARADGAGFAPGQFPVLLELWGGDGLTQRELLDRLDIEQATMANTLSRMERDGLILRRRHPKDRRAQLVFLTTRGKALRETAMAAACATEEALFRGFRRFERELLLEYMRMVLANLGRDPRA*