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SCNpilot_expt_1000_bf_scaffold_13353_curated

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_13353_curated_1
Ensifer adhaerens, Ensifer, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1..438)
DNA (438bp) protein (146aa)
DNA polymerase I {ECO:0000313|EMBL:KDP70813.1}; TaxID=106592 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Ensifer.;" source="Ensifer adhaerens (Sinorhizobium morelense).;"
DNA polymerase I; K02335 DNA polymerase I [EC:2.7.7.7]
DNA polymerase I n=1 Tax=Ochrobactrum anthropi RepID=UPI00028879EA
SCNpilot_expt_1000_bf_scaffold_13353_curated_2
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1065..1505
DNA (441bp) protein (147aa)
Transcriptional regulator MarR family n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CRA3_9RHIZ
Transcriptional regulator MarR family {ECO:0000313|EMBL:EYR80283.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
putative transcriptional regulator, MarR family
SCNpilot_expt_1000_bf_scaffold_13353_curated_3
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1885..2955
DNA (1071bp) protein (357aa)
Beta-Ala-His dipeptidase n=1 Tax=Shinella zoogloeoides DD12 RepID=V5D097_9RHIZ rbh
Beta-Ala-His dipeptidase {ECO:0000313|EMBL:EYR80284.1}; EC=3.4.13.20 {ECO:0000313|EMBL:EYR80284.1};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylase rbh
SCNpilot_expt_1000_bf_scaffold_13353_curated_4
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3004..4107
DNA (1104bp) protein (368aa)
Putative integral membrane protein {ECO:0000313|EMBL:EYR80285.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
hypothetical protein; K07027 rbh
Uncharacterized protein n=8 Tax=Rhizobium meliloti RepID=F6BU39_SINMB rbh
SCNpilot_expt_1000_bf_scaffold_13353_curated_5
unknown

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comp(4127..4297)
DNA (171bp) protein (57aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_13353_curated_6
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4997..6991
DNA (1995bp) protein (665aa)
Penicillin-binding protein 1A {ECO:0000313|EMBL:EYR80287.1}; EC=2.4.2.- {ECO:0000313|EMBL:EYR80287.1};; EC=3.4.-.- {ECO:0000313|EMBL:EYR80287.1};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
penicillin-binding protein 1A n=1 Tax=Rhizobium sp. (strain BR816) RepID=UPI00037F8E06 rbh
penicillin-binding protein, 1A family rbh
SCNpilot_expt_1000_bf_scaffold_13353_curated_7
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7376..8086)
DNA (711bp) protein (237aa)
Uncharacterized protein {ECO:0000313|EMBL:EYR80289.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
Uncharacterized protein n=1 Tax=Microvirga sp. WSM3557 RepID=I4YTV9_9RHIZ
phage portal protein, HK97 family
SCNpilot_expt_1000_bf_scaffold_13353_curated_8
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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8573..10009
DNA (1437bp) protein (479aa)
Chaperone protein DnaK {ECO:0000256|HAMAP-Rule:MF_00332}; HSP70 {ECO:0000256|HAMAP-Rule:MF_00332}; Heat shock 70 kDa protein {ECO:0000256|HAMAP-Rule:MF_00332}; Heat shock protein 70 {ECO:0000256|HAMAP-Rule:MF_00332}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
Chaperone protein DnaK n=1 Tax=Rhizobium sp. RepID=L0NL38_RHISP
dnaK; molecular chaperone DnaK; K04043 molecular chaperone DnaK
Displaying 8 items

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