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SCNpilot_expt_1000_bf_scaffold_15370_curated_1

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: 2..562

Top 3 Functional Annotations

Value Algorithm Source
Pyridoxal 4-dehydrogenase Pld n=1 Tax=Shinella zoogloeoides DD12 RepID=V5D5B6_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 84.1
  • Coverage: 113.0
  • Bit_score: 190
  • Evalue 1.60e-45
Pyridoxal 4-dehydrogenase Pld {ECO:0000313|EMBL:EYR81072.1}; EC=1.1.1.107 {ECO:0000313|EMBL:EYR81072.1};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 84.1
  • Coverage: 113.0
  • Bit_score: 190
  • Evalue 2.30e-45
fdh; D-threo-aldose 1-dehydrogenase similarity KEGG
DB: KEGG
  • Identity: 54.0
  • Coverage: 126.0
  • Bit_score: 138
  • Evalue 1.80e-30

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 561
AACGAGGCCGACATCGTGCTCGACGCGATGAACGAAGCCGCGCTGGACTGCACGCTGCTGGCCGGCCGCCACACGCTTCTGGAGCAGAACGCGCTCGCCCTCCTGGAAAAGGCCCGGCAGGCCGGCATGGGCATCATGATCGGCGGCGTGTTCAATTCCGGCATCCTTGCCGCCGGTCCCGGCGGCCACCGCAAGTTCAATTATCAGGACGTGCCCGAGGACGTGGCAAGGCGGGTCGACGCGCTCGCGGCGGCCTGCGCGCGCTTCGGCGTGCCGCTCGCGGCGGCGGCGATCCAGTATCCGCTGCGCCATGCTGCCGTCATCACCGTGCTGATCGGCCGCGCGACGCCAGGCAGGTCCATCAGACTGTCGGCTGGTTCGAAGAGGGCACTCCCGCCGATTTCTGGGAAACGCTGGAGCACGAAGGCCTCGCCGCCTGAACGGCGGCGGCCCCCGCCCGCATTACATCGTCGCGCCGATTTTCCAGGGCACGAATTCGAGATCGCGATAGCCAGACTGTTCGGATTTCGTGCCCTCGTCCGACGGGGACTTCTGCCGTGA
PROTEIN sequence
Length: 187
NEADIVLDAMNEAALDCTLLAGRHTLLEQNALALLEKARQAGMGIMIGGVFNSGILAAGPGGHRKFNYQDVPEDVARRVDALAAACARFGVPLAAAAIQYPLRHAAVITVLIGRATPGRSIRLSAGSKRALPPISGKRWSTKASPPERRRPPPALHRRADFPGHEFEIAIARLFGFRALVRRGLLP*