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SCNpilot_expt_1000_bf_scaffold_15370_curated_4

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: comp(3110..3790)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator {ECO:0000313|EMBL:EYR81075.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 95.6
  • Coverage: 226.0
  • Bit_score: 422
  • Evalue 4.30e-115
transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 78.6
  • Coverage: 220.0
  • Bit_score: 344
  • Evalue 2.60e-92
  • rbh
UPI0003CF26CA related cluster n=1 Tax=unknown RepID=UPI0003CF26CA similarity UNIREF
DB: UNIREF100
  • Identity: 79.1
  • Coverage: 220.0
  • Bit_score: 344
  • Evalue 8.10e-92
  • rbh

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 681
ATGGACATCGACGCATCCAATCTCAACCGGTCCCTTCCGCTGCGCGACCAGATCTACCACAAGGTCCGCGGCCTGATCGTCAGCGGCCAGATGAAGCCCGGAGAAGCGATCAACGAGATGGCCATCGCCCAGTCGCTCGGCGTGTCCCGCACGCCGGTGCGCGAGGCCGTCAAGCGCATCAGCGACGAGGGCCTCGTCAACGTCTTCGCGCAGACCGGCACTTTCGTCGCGCGCATCAGCATCCGCGACATCGAGGAGGCCTATGTCATCCGCAACGCGCTGGAAATGGAGAGCGCGCGGCGCGCCGCCGACAAGCTGGCGCCGGCGCAGGCCGAGGCGCTGGAAGACAACATCGCCGCCCACCGCACGGCAATCGCCCGCGGCCGCTACAGCGACGCCATCCAGCTCGACGACATCTTCCACCGCACGATTGCCGAAGTGAACGGCTTCCACATGCTCTGGCGCGCGGTCGACATTTCCAAGGCGCAGATGGACCGCGGGCGCTACCTCGCCATCCCCAAGCCGGGCTATGGCGAGCAGACGATCCAGCAGCACCAGGCGATCCTCAAGGCCCTGCAGCGCCACGACGGCGAGGCGGCGGCGACCGCCATGCGCGAGCACCTCAACACATCGCTGCGCAACACGCTGGAAGTGGCCGCCGCGAACAATGCCTTCGGCTGA
PROTEIN sequence
Length: 227
MDIDASNLNRSLPLRDQIYHKVRGLIVSGQMKPGEAINEMAIAQSLGVSRTPVREAVKRISDEGLVNVFAQTGTFVARISIRDIEEAYVIRNALEMESARRAADKLAPAQAEALEDNIAAHRTAIARGRYSDAIQLDDIFHRTIAEVNGFHMLWRAVDISKAQMDRGRYLAIPKPGYGEQTIQQHQAILKALQRHDGEAAATAMREHLNTSLRNTLEVAAANNAFG*