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SCNpilot_expt_1000_bf_scaffold_15370_curated_7

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: 6623..7621

Top 3 Functional Annotations

Value Algorithm Source
ABC transporter, membrane spanning protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5F097_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 94.0
  • Coverage: 332.0
  • Bit_score: 596
  • Evalue 2.30e-167
  • rbh
ABC transporter, membrane spanning protein {ECO:0000313|EMBL:EYR81078.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 94.0
  • Coverage: 332.0
  • Bit_score: 596
  • Evalue 3.20e-167
rbsC; ribose ABC transporter permease; K02057 simple sugar transport system permease protein similarity KEGG
DB: KEGG
  • Identity: 75.3
  • Coverage: 332.0
  • Bit_score: 498
  • Evalue 1.20e-138
  • rbh

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 999
ATGACGGACATCGCCGCCATGGGACAGACAACGAAGGACACCGCGCGCTTCAGCCAGGGCAGCCGCATGGTCGGCCTCGTCTCTCGCGCGGGCCTCACGCTCGCCATCCTCGCCGTCATCCTCTACGGCTCGCTCGCCAATCCGGTCTTCTTCACGGCCGGCAATTTCGTGAACGTGCTGATGTCCATGTCCATCGTCGGCATCGTCGTCGTCGGCATGACCTTCGTTCTGGTCGTCGGCGGCATGGCGGACCTTTCGGTACCGGCGACCATCGCCTGCGGCGCGATCCTGTCGCTCGCCCTCCAGCCCTATATCGGCCCGGTTCCGGCCTTTGCCGTCGCGGTGCTGCTGGCCGGGCTCACCGGCCTCGTCAACGGCGTGCTCGTCGGCTATGTCGGCATCAATCCCATCATCGCCACGCTCGGCATGGGCACCATCGTGCTCGGCATCGTGCAGGCCGCCGTCGGCGGCGTCATCGTCTACGGCACGGATCCGAGCTCGGCGGATTTCGTCAAGAGCCGCATCCTCGGCGTGCCGATGATCGCCGTCATCTTCATCGCCATCGCAATCCTCGGCAATTTCGTGCTTTCACGCACCTTCTGGGGCCGCTGGACCATCGCGACGGGCGGCAATTACAGCGCCGCGCAAGCGAGCGCCGTGCCGGTGCGGGCCGTCCGGGCCGGCGCCTTCGTCATCACCGCCTTTGCCGCGGGCTTCAGCGGCGGCCTGCTCGGCCTGACGCTGCAGAGCGCCCGCCCGCTCGTCGGCCAGGGCTACGAGTTCAGCGCCATCACGGCGGTCGTCGTCGGCGGGGTGTCGATCATGGGCGGCTTCGGCTCCATTCCGCGCGCCATGGCCGGCCTCGTCTTCGTGCAGCTCCTGACCAATGTCATGGTCCTTCAGGGCGTGCGCACGCCGATCCAGGGCTTCGTCCTCGGCCTCCTGATCGCCGGTGCCGTCGCGCTCGACATTGCGCTTCGCAAGCGGGGTGTCGCCTGA
PROTEIN sequence
Length: 333
MTDIAAMGQTTKDTARFSQGSRMVGLVSRAGLTLAILAVILYGSLANPVFFTAGNFVNVLMSMSIVGIVVVGMTFVLVVGGMADLSVPATIACGAILSLALQPYIGPVPAFAVAVLLAGLTGLVNGVLVGYVGINPIIATLGMGTIVLGIVQAAVGGVIVYGTDPSSADFVKSRILGVPMIAVIFIAIAILGNFVLSRTFWGRWTIATGGNYSAAQASAVPVRAVRAGAFVITAFAAGFSGGLLGLTLQSARPLVGQGYEFSAITAVVVGGVSIMGGFGSIPRAMAGLVFVQLLTNVMVLQGVRTPIQGFVLGLLIAGAVALDIALRKRGVA*