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SCNpilot_expt_1000_bf_scaffold_5731_curated_4

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: comp(3263..3919)

Top 3 Functional Annotations

Value Algorithm Source
Glutamate and aspartate transporter subunit membrane component of ABC superfamily {ECO:0000313|EMBL:CDX42682.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 76.8
  • Coverage: 211.0
  • Bit_score: 339
  • Evalue 4.60e-90
hypothetical protein n=1 Tax=Xanthobacteraceae RepID=UPI00037D901D similarity UNIREF
DB: UNIREF100
  • Identity: 65.6
  • Coverage: 215.0
  • Bit_score: 283
  • Evalue 1.60e-73
polar amino acid ABC transporter inner membrane subunit; K02029 polar amino acid transport system permease protein similarity KEGG
DB: KEGG
  • Identity: 64.3
  • Coverage: 210.0
  • Bit_score: 278
  • Evalue 1.70e-72

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Taxonomy

Mesorhizobium plurifarium → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 657
TTGTTCGATATTTCCGTCATTCAGCAGAACTGGCCGTTGTTCTGGAACGGGCTGCTGGTCACGCTGTTCTATTCGGCGATCTCCATCGCCGCAGGTCTCGTGATCGGATTGATCGTCGGATTGATCCAGCTCACCGGTTCACGGGCCCTGTCCGCCCTCGGGCGGGTCTATGTCGAGATTTTCCGTAATATCCCGCTTCTGGTGATCCTGCTGTGGATCTACTACGCCTTCCCCATTTTCGCGGGCCTGGCCGTGACCAAGTTCTGGGCCGGCTTCGCGGGCCTCAGCCTCTATGCCGGCGCCTTCTATGCCGAAATCCTTCGGGCCGGCGTCCAGTCGATCGACAAGGGCCAGACCGATGCCTCCACCGCGCTCGGCATGACCTACGGCCAGCGCATGCGCCGCGTGATCCTGCCGCAGGCCTTCCGCCGCATGATCCCGCCGCTTGCCGGGCAGTCCATCATCCAGATCAAGAATACCACCCTCATGTCCATGATCACCGTGCCCGACCTGCTCTACCAGGCAAGCTATGTCAGCTCCTTCACCTACCGGCCGATGGAAGTCTACACCATGGTCGGCGTCATGTTCCTCGTCCTGCTCGTGCCGCTGACATTCCTGTCGCGCAAGCTGGAGACCATTTCGGAGCGCGTCAAATGA
PROTEIN sequence
Length: 219
LFDISVIQQNWPLFWNGLLVTLFYSAISIAAGLVIGLIVGLIQLTGSRALSALGRVYVEIFRNIPLLVILLWIYYAFPIFAGLAVTKFWAGFAGLSLYAGAFYAEILRAGVQSIDKGQTDASTALGMTYGQRMRRVILPQAFRRMIPPLAGQSIIQIKNTTLMSMITVPDLLYQASYVSSFTYRPMEVYTMVGVMFLVLLVPLTFLSRKLETISERVK*