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SCNpilot_expt_1000_bf_scaffold_4159_curated_12

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: comp(7826..8320)

Top 3 Functional Annotations

Value Algorithm Source
Imidazoleglycerol-phosphate dehydratase HisB n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CZ94_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 97.6
  • Coverage: 164.0
  • Bit_score: 325
  • Evalue 3.70e-86
  • rbh
Imidazoleglycerol-phosphate dehydratase {ECO:0000256|HAMAP-Rule:MF_00076, ECO:0000256|RuleBase:RU000599}; Short=IGPD {ECO:0000256|HAMAP-Rule:MF_00076};; EC=4.2.1.19 {ECO:0000256|HAMAP-Rule:MF_00076, ECO:0000256|RuleBase:RU000599};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 97.6
  • Coverage: 164.0
  • Bit_score: 325
  • Evalue 5.20e-86
hisB; imidazoleglycerol-phosphate dehydratase (EC:4.2.1.19); K01693 imidazoleglycerol-phosphate dehydratase [EC:4.2.1.19] similarity KEGG
DB: KEGG
  • Identity: 93.9
  • Coverage: 164.0
  • Bit_score: 318
  • Evalue 1.10e-84
  • rbh

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 495
GTGGGCTTCTTCGATCACATGCTCGACCAGTTGTCGCGCCATTCGCTCATCGACATGGAGATCAAGACCGAAGGGGACCTGCATGTCGACGACCACCACACGGTCGAGGACACCGGCATCGCCATCGGCCAGGCTATCGCCAAGGCGCTCGGCGACCGGCGCGGCATCACCCGCTACGCCTCGCTCGACCTTGCCATGGACGAGACGATGACGCGTGCCGCCGTGGACGTCTCCGGCCGTCCGTTCCTCGTGTGGAACGTGAATTTCTCCGCCCCGAAGATCGGCACCTTCGACACCGAGCTGGTGCGCGAATTCTTCAACGCGCTCGCCCAGCATGCCGGCATCACGCTGCATATCCAGAACATCTACGGCGCGAACAACCATCATATCTCCGAGACGTGCTTCAAGGCCGTCGCGCGCGTGCTGCGCACCGCGACCGAGATCGATCCCCGCCAGGCGGGCCGCGTTCCCTCGACGAAGGGTTCGCTGGCCTGA
PROTEIN sequence
Length: 165
VGFFDHMLDQLSRHSLIDMEIKTEGDLHVDDHHTVEDTGIAIGQAIAKALGDRRGITRYASLDLAMDETMTRAAVDVSGRPFLVWNVNFSAPKIGTFDTELVREFFNALAQHAGITLHIQNIYGANNHHISETCFKAVARVLRTATEIDPRQAGRVPSTKGSLA*