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SCNpilot_expt_1000_bf_scaffold_3649_curated_3

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: 3313..6207

Top 3 Functional Annotations

Value Algorithm Source
Bifunctional uridylyltransferase/uridylyl-removing enzyme {ECO:0000256|HAMAP-Rule:MF_00277, ECO:0000256|SAAS:SAAS00228994}; Short=UTase/UR {ECO:0000256|HAMAP-Rule:MF_00277};; Bifunctional [protein-PII] modification enzyme {ECO:0000256|HAMAP-Rule:MF_00277}; Bifunctional nitrogen sensor protein {ECO:0000256|HAMAP-Rule:MF_00277}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 95.5
  • Coverage: 947.0
  • Bit_score: 1792
  • Evalue 0.0
Bifunctional uridylyltransferase/uridylyl-removing enzyme n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CUJ3_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 95.5
  • Coverage: 947.0
  • Bit_score: 1792
  • Evalue 0.0
  • rbh
glnD; PII uridylyl-transferase (EC:2.7.7.59) similarity KEGG
DB: KEGG
  • Identity: 81.4
  • Coverage: 929.0
  • Bit_score: 1505
  • Evalue 0.0
  • rbh

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2895
ATGCGAACCGAACGGGCGATGGAAGACAGGCGGGACGCAGGCCGGCATCCGATGGAAAAGAAGCTTCTGGCACCGGCCGAGTCCGGACTTCTCGACGTTCCGGCGCTGCGCGCCCGCTGCGAGTTCATCGCCAGCACCAATGCCGACTACCGCGACCGCATGCGACGCGAGCTTCTGGCCGAGTTCAAGACGGTCAATGCGGCGGGCCGCGAGCGCGCCCGCGAACTGCTCTTTGCCGACGGCAGCGGCCTGCAATGCGCCGCACGCATCTCCTGGCTGCAGGACCAGCTCATCGCGGTCCTCCACGATTTCACGCTCAACCATGTCTTCAGCGCCGGCCAGGCCCCGCCCGCCGCCCGCATCACGGTGACCGCCGTCGGCGGCTACGGCCGCGGCACGCTGGCGCCGGGCTCGGATATCGACCTGCTCTTCCTGCTGCCGGCAAAGCCGGCCGCCTGGAGCGCGCCGGCCATCGAGTTCATGCTCTATATCCTGTGGGATCTCGGCTTCAAGGTCGGCCACGCCACGCGCAATCTGGAGGAATGCATCCAGCTCTCCAAGGGCGACATGACCATCCGCACGGCGATCCTGGAGGCGCGCTATATCTGCGGCTCGGTGGCGCTGTTCGAGGAGATGGCAGTGCGCTTCGACCGCGAGATCGTGCGCGGCACCGGTCCGGAATTCATCGCGGCGAAGCTCGCCGAACGCGACGAGCGCCACCGCAAGGCCGGCGATACGCGCTACCTCGTCGAGCCCAACGTCAAGGAAGGCAAGGGCGGGCTGCGCGACCTGCACACGCTGTTCTGGATCGCCAAGTATTTCTACCACATCCGCGATCCCGCCGAGCTGGTGATGCTCGGCGTCCTGTCGCGCCAGGAATACAAGCTCTTCCAGAAGGCGGACGATTTCCTCTGGGCGGTGCGCTGCCACATGCATTTCCTGACCGGCAAGGCGGAGGAGCGGCTGTCCTTCGATATCCAGCGCGAGATCGCCGAATGCCTCGGCTACCAGCCGCATCCCGGCCTTTCCGCCGTCGAGCGCTTCATGAAGCACTATTTCCTCGTGGCCAAGGACGTCGGCGACCTGACGCGCATCTTCTGCGCCACGCTGGAGGACCAGCAGGCCAAGGAAGCGCCAGGCATCACCGCCGCGATCAGCCGCTTCACGCGGCGCGCGCGCAAGATCGCCGGCACGCTGGATTTCCTGGAGGACCGCGGCCGCATCACCATCGCCGGCCCCGATGTCTTCAAGCGCGACCCGGTCAACCTCATCCGCCTCTTCCACATCGCCGACATCAACGGGCTGGAATTCCACCCCGACGCGCTGAAGGAGGTCCCCCGCTCGCTGAAGCTCGTCAACGCCGCGCTGCGCGAGGACGAGGAGGCGAACCGCCTGTTCCTCTCCATCCTCACCTCGCCGCGCGATCCGGCGCTGATTCTCCGCCGCATGAACGAGGCGGGCGTGCTCGGCCGGTTCATTCCGGATTTCGGCAAGATCGTCGCGATGATGCAGTTCAACATGTATCACCACTACACGGTCGACGAGCACCTGATCCGCTCCGTCGGCGTGCTGGCGGACATCGACCAGGGGCGCGAGAAGGAAGCCCACCCCCTCAGCTTCCAGGTGATGCCGAGCATCGAGGACCGCATCCCGCTCTATGTCGCGGTGCTGCTGCACGACATCGCCAAGGGCCGGCCGGAGGACCATTCGGAGGCGGGCGCCAAGGTCGCGCGAAAACTCTGCCCGCGCTTCGGCCTTTCGCCCAAGCAGACGGAGCTGGTCGTCTGGCTGATCGAGGAGCACCTGACCATGTCGATGGTCGCCCAGACCCGCGACCTCAACGACCGCAAGACCATCGCCGATTTCGCCGACAGGGTGCAGTCGATGGAACGGCTGAAGATGCTGCTGGTGCTGACGGTCTGCGACATCCGGGCGGTCGGCCCGGGCGTCTGGAACGGCTGGAAGGGCCAGCTCCTGCGCACGCTCTACTACGAGACCGAACTGCTCATCTCCGGCGGCTTTTCCGAATTGTCGCGCAAGGAGCGGGCGCAGGCCGCCCGCGAGATGCTCTCCGAGGCGCTGCCGGCCGACTGGAGCCAGAAGGATCGCAAGACCTATACGCGCCTCAACTACGAGCCCTATCTCCTGACGGTCTCGCTGGAGGACCAGGTGCGCCACGCCGCGTTCATCCGCGAGGCGGACAGGGCCAAGCAGACGCTGGCGACGGCGGTGCGCACGCACTCCTTCCACGCCATCACCGAGATCACGGTCCTGTCCCCCGACCATCCGCGCCTGCTGACGGTCATCGCCGGGGCCTGCGCGGCGGCGGGCGCGAACATCGTCGACGCACAGATCTTCACCACCTCCGACGGACGCGCGCTGGACACGATCCTCGTCAACCGCGAATTCCCCAATGACGCGGACGAGACGCGCCGCGCCGGCACGATCGGCCGCATGATCGAGGACGTCCTGTCGGGTCGCAAGCGCCTGCCCGAGGTGATCGCGACGCGCACGAAGAGCCGCAAGCGCAGCCGCACCTTCACGGTCTCGCCGGCCGTCACCATCTCCAACACGCTGTCGAACAAGTTCACCGTCATCGAGATCGAGTGCCTCGACCGCCCCGGCCTTCTCTCCGAGGTCACGGCCGTGCTCTCCGACCTCTCGCTCGACATCGCCTCGGCGCATATCACCACCTTCGGCGAGAAGGTCATCGACACCTTCTACGTCACCGACCTCGTCGGCCAGAAGGTTACCAACGAAAACCGGCAGGCCAACATCGTCGCGCGGCTGAAGGCCGTCATGGCCGACGAGGCGGACGAGCTGCGCGACCGCATGCCGCCGGGCATGATCGCGCCGGTTCCCGCCGTCGCGAGAAGGATCAGGGCAGAACAATGA
PROTEIN sequence
Length: 965
MRTERAMEDRRDAGRHPMEKKLLAPAESGLLDVPALRARCEFIASTNADYRDRMRRELLAEFKTVNAAGRERARELLFADGSGLQCAARISWLQDQLIAVLHDFTLNHVFSAGQAPPAARITVTAVGGYGRGTLAPGSDIDLLFLLPAKPAAWSAPAIEFMLYILWDLGFKVGHATRNLEECIQLSKGDMTIRTAILEARYICGSVALFEEMAVRFDREIVRGTGPEFIAAKLAERDERHRKAGDTRYLVEPNVKEGKGGLRDLHTLFWIAKYFYHIRDPAELVMLGVLSRQEYKLFQKADDFLWAVRCHMHFLTGKAEERLSFDIQREIAECLGYQPHPGLSAVERFMKHYFLVAKDVGDLTRIFCATLEDQQAKEAPGITAAISRFTRRARKIAGTLDFLEDRGRITIAGPDVFKRDPVNLIRLFHIADINGLEFHPDALKEVPRSLKLVNAALREDEEANRLFLSILTSPRDPALILRRMNEAGVLGRFIPDFGKIVAMMQFNMYHHYTVDEHLIRSVGVLADIDQGREKEAHPLSFQVMPSIEDRIPLYVAVLLHDIAKGRPEDHSEAGAKVARKLCPRFGLSPKQTELVVWLIEEHLTMSMVAQTRDLNDRKTIADFADRVQSMERLKMLLVLTVCDIRAVGPGVWNGWKGQLLRTLYYETELLISGGFSELSRKERAQAAREMLSEALPADWSQKDRKTYTRLNYEPYLLTVSLEDQVRHAAFIREADRAKQTLATAVRTHSFHAITEITVLSPDHPRLLTVIAGACAAAGANIVDAQIFTTSDGRALDTILVNREFPNDADETRRAGTIGRMIEDVLSGRKRLPEVIATRTKSRKRSRTFTVSPAVTISNTLSNKFTVIEIECLDRPGLLSEVTAVLSDLSLDIASAHITTFGEKVIDTFYVTDLVGQKVTNENRQANIVARLKAVMADEADELRDRMPPGMIAPVPAVARRIRAEQ*