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SCNpilot_expt_1000_bf_scaffold_3649_curated_15

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: 13411..14799

Top 3 Functional Annotations

Value Algorithm Source
(Dimethylallyl)adenosine tRNA methylthiotransferase MiaB n=1 Tax=Shinella zoogloeoides DD12 RepID=V5EQK6_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 91.6
  • Coverage: 466.0
  • Bit_score: 860
  • Evalue 9.00e-247
  • rbh
tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase {ECO:0000256|HAMAP-Rule:MF_01864, ECO:0000256|SAAS:SAAS00078006}; EC=2.8.4.3 {ECO:0000256|HAMAP-Rule:MF_01864, ECO:0000256|SAAS:SAAS00077858};; (Dimethylallyl)adenosine tRNA methylthiotransferase MiaB {ECO:0000256|HAMAP-Rule:MF_01864}; tRNA-i(6)A37 methylthiotransferase {ECO:0000256|HAMAP-Rule:MF_01864}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 91.6
  • Coverage: 466.0
  • Bit_score: 860
  • Evalue 1.30e-246
(dimethylallyl)adenosine tRNA methylthiotransferase; K06168 bifunctional enzyme involved in thiolation and methylation of tRNA similarity KEGG
DB: KEGG
  • Identity: 81.9
  • Coverage: 464.0
  • Bit_score: 779
  • Evalue 8.30e-223
  • rbh

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1389
ATGAGCGAACAGTCCGTCATCCCTTCCCCGGCCGATGCCGAGCCGATCACCCGCAAGGTCTTCGTCAAGACCTACGGCTGCCAGATGAACGTCTACGACAGCGAGCGCATGACGGATGCGCTGTCGAAGGACGGCTATCAGGCGACGGACGTCCTGGAAGAGGCCGATCTCGTCCTCCTCAATACCTGCCACATCCGCGAGAAGGCGGCCGAGAAGGTCTATTCCGAGCTCGGGCGCCTGCGCGAAATGAAGAAGGCGCGCGCGAAGGACGGCCGCGAGATGGGGATCGGCGTCACCGGCTGCGTCGCCCAGGCCGAGGGCAGGGAGATCCTGCGCCGCGCCCCTTCCGTCGATCTGGTGATCGGCCCGCAGACCTACCACCGCCTGCCCGAGGCGCTGCGCCGCGCCAAGGGCGGCGAGCGCGTCGTCGAGACGGACTATGCGCTGGAAGACAAGTTCGAGCACCTGCCCGCGCCGGAAAAGGCCAGGACCCGCGCCCGCGGCGTCACCGCCTTCCTCACCGTGCAGGAGGGCTGCGACAAGTTCTGCACCTTCTGCGTGGTGCCCTATACGCGCGGCTCGGAAGTCTCCCGCCCCGTCGCCCAGATCGTTGCCGAGGCCGAGCGCCTCGCCGAGGCGGGCGTGCGCGAGATCACCCTGCTCGGCCAGAACGTCAACGCCTGGCACGGCCTCGGCCCCGATGGCCGCGAATGGGGCCTCGGCGACCTCCTTTATCGCCTCGCCGAAATCGAAGGCCTCGCGCGCCTGCGTTATACGACCAGCCACCCGCGCGACATGGACGATCGCCTCATCGAGGCGCACCGGGACCTGCCGAAGCTGATGCCCTACCTGCACCTGCCGGTGCAGGCCGGCTCCGACCGTATCCTGAAGGCCATGAACCGGCGCCACACGGCGGCCGAATATGTCGCCCTCATCGAGCGCATCCGCGCCGTCCAGCCGGAGCTTGCCATATCCGGCGATTTCATCGTCGGCTTCCCCGGCGAGACCGACCAGGACTTCGAGGATACGATGCGCCTCATCGAGACGGTGGGTTATGCACAGGCATTTTCGTTCAAGTATTCCATCCGCCCCGGCACGCCGGGCGCGGAAATGGATGGCCATGTCGCGGAACATTTGAAGGCCGAACGTCTTGAAAGATTGCAGGCTTTGCTCTTCCGCCAGCAGCGCGACTTCGCAAGCGGCTGCATTGGCAAGGAGATCGACCTGTTGCTGGAGAAGCCCGGGCGCCTGCCCGGCCAGCTCGTCGGCCGCTCGCCCTGGCTGCAGCCTGTGAATATTGATGCAAAAGGTTCTGAAATCGGTGACATTATCCGGGTACGAATCACCGATGCCGGGCCCAACAGCCTCTTCGCGCAAGCGATCGGTTGA
PROTEIN sequence
Length: 463
MSEQSVIPSPADAEPITRKVFVKTYGCQMNVYDSERMTDALSKDGYQATDVLEEADLVLLNTCHIREKAAEKVYSELGRLREMKKARAKDGREMGIGVTGCVAQAEGREILRRAPSVDLVIGPQTYHRLPEALRRAKGGERVVETDYALEDKFEHLPAPEKARTRARGVTAFLTVQEGCDKFCTFCVVPYTRGSEVSRPVAQIVAEAERLAEAGVREITLLGQNVNAWHGLGPDGREWGLGDLLYRLAEIEGLARLRYTTSHPRDMDDRLIEAHRDLPKLMPYLHLPVQAGSDRILKAMNRRHTAAEYVALIERIRAVQPELAISGDFIVGFPGETDQDFEDTMRLIETVGYAQAFSFKYSIRPGTPGAEMDGHVAEHLKAERLERLQALLFRQQRDFASGCIGKEIDLLLEKPGRLPGQLVGRSPWLQPVNIDAKGSEIGDIIRVRITDAGPNSLFAQAIG*