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SCNpilot_expt_1000_bf_scaffold_3649_curated_21

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: 19610..20029

Top 3 Functional Annotations

Value Algorithm Source
Putative transcriptional regulator {ECO:0000313|EMBL:EYR83264.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 97.1
  • Coverage: 139.0
  • Bit_score: 263
  • Evalue 2.10e-67
Putative transcriptional regulator n=1 Tax=Rhizobium sp. CF080 RepID=J2JF39_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 91.4
  • Coverage: 139.0
  • Bit_score: 253
  • Evalue 8.90e-65
HTH-type transcriptional regulator R00410 similarity KEGG
DB: KEGG
  • Identity: 92.1
  • Coverage: 139.0
  • Bit_score: 248
  • Evalue 1.50e-63

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 420
ATGATGGAAAACAAGAAGAAGCCGAATCCGATCGATATACATGTCGGCAGCCGGATCCGGCTTCGCAGGACCATGCTCGGCATGAGCCAGGAGAAGCTGGGCGAGAGCCTCGGCATTACCTTCCAGCAGATTCAGAAATACGAAAAGGGCACCAACCGCGTCGGGGCCAGCCGCCTGCAGAACATTTCCAGCATCCTCAACGTGCCGGTCTCGTTCTTCTTCGAGGATGCGCCGGGCGAGCAGGGCGACGCCCAGGCCGGCCTTGCCGAAGCCTCCAGCTCCAATTACGTGGTCGATTTCCTCTCCTCATCCGAAGGCCTGCAGCTCAACCGCGCCTTCGTGAAGATCGGCGATCCCAAGGTCCGCCGCAAGCTTGTCGATCTGGTCAAGGCGCTCGCCGCCGAAGCCGAGATCGAGTGA
PROTEIN sequence
Length: 140
MMENKKKPNPIDIHVGSRIRLRRTMLGMSQEKLGESLGITFQQIQKYEKGTNRVGASRLQNISSILNVPVSFFFEDAPGEQGDAQAGLAEASSSNYVVDFLSSSEGLQLNRAFVKIGDPKVRRKLVDLVKALAAEAEIE*