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SCNpilot_expt_1000_bf_scaffold_3649_curated_30

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: comp(28135..29328)

Top 3 Functional Annotations

Value Algorithm Source
Putative DNA recombination protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5D1L7_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 88.7
  • Coverage: 397.0
  • Bit_score: 685
  • Evalue 4.50e-194
  • rbh
Putative DNA recombination protein {ECO:0000313|EMBL:EYR83255.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 88.7
  • Coverage: 397.0
  • Bit_score: 685
  • Evalue 6.20e-194
DNA recombination protein; K09760 DNA recombination protein RmuC similarity KEGG
DB: KEGG
  • Identity: 69.0
  • Coverage: 403.0
  • Bit_score: 527
  • Evalue 3.70e-147
  • rbh

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1194
ATGATCGATCCCGCATTCGACGCGCTCGTCTCCTCCTTCCTCCACCGGCTCGGCGGCCCCGGCCCGGCTCTGGTGCTGCTTGCGGCCGTGCTGCTGGCGGCCTTCGGGCTCCTTTCCGCACGCCGCAGCCAGGCCCGCCAGCGGGAGGCGGCGGCGATGGCGGAGGTGCGCTTTTCCGAGCTCCTGAAGGCGCAGACCGAGATGCAGGGACGCGTCGCCGCCATGGCTGACGTGTTCGGCAGCAAGCAGGCCGAGACGAACCAGGCGATCAACAGCCGGCTCGACGGGCTGACGCAGCGGCTCGGCCAGTCGATCTCCGAGCAGACCCGCGCGACGCACGAGAATCTCCGCCGCCTGCAGGAGCGGCTGGCGGTGATCGACAATGCCCAGACGAACATCCAGTCGCTGGCGAAGGACGTGGTCGGGCTCCAGGCCATTCTCTCCAACAAGCAGACGCGCGGCGCCTTCGGCCAGTCACGCATGGAGACGATCATCGCCGACGCCATGCCGCCCGGCGCCTACCAGTTCCAGGCGCAGCTTTCCAACGGCGTGCGCCCGGACTGCACCATCCGCATGCCGAACGGCCAGCCGCCGCTCGTCGTCGACGCGAAATTCCCGCTGGAGGCGTGGAACGCCATGGCGGACGGGCGCTCGCCGGAGGCCGCGAAGATCGCCGCCCAGCAGTTCCGCCGCGACATGGAGGTGCATATCCGGGACATCTCGGAAAAATACCTCCTTGCCGGCGAGACGCAGGACACCGCCTTCCTCTTCGTCCCCTCGGAATCGATCTTCGCCAGCATCCACGAGAATTTCGAGCCCGTCGTGCAACGCGCGCACCGCGCCCGCATAGTCATCGTCTCGCCGTCGCTGCTGATGCTTTCGGTGCAGGTGCTGCAATCGCTCCTCAAGGACCAGCGGATGCGCGAGCAGGCGCATGTCATCCAGGGCGAGGTCGCGCGGCTGATGGACGATTTGACGCGGCTCGACGACCGGGTGCGCAAGCTGCATGGCCATTTCACCGCCGCGCAGAAGGACGTGGACCTGATTCTGACGTCCACGGAGAAGCTTGCGCGCCGCGGGACGCGCATCGGCGAGCTCGAATTCGAGACCGTTTCGGAGCTTTCGCACGAGCGGGAGAAGGCCACCGAGAGCCGGACGGGCCAGTTGCCGCTGAGAGTGGTTGACGAGGACTGA
PROTEIN sequence
Length: 398
MIDPAFDALVSSFLHRLGGPGPALVLLAAVLLAAFGLLSARRSQARQREAAAMAEVRFSELLKAQTEMQGRVAAMADVFGSKQAETNQAINSRLDGLTQRLGQSISEQTRATHENLRRLQERLAVIDNAQTNIQSLAKDVVGLQAILSNKQTRGAFGQSRMETIIADAMPPGAYQFQAQLSNGVRPDCTIRMPNGQPPLVVDAKFPLEAWNAMADGRSPEAAKIAAQQFRRDMEVHIRDISEKYLLAGETQDTAFLFVPSESIFASIHENFEPVVQRAHRARIVIVSPSLLMLSVQVLQSLLKDQRMREQAHVIQGEVARLMDDLTRLDDRVRKLHGHFTAAQKDVDLILTSTEKLARRGTRIGELEFETVSELSHEREKATESRTGQLPLRVVDED*