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SCNpilot_expt_1000_bf_scaffold_4263_curated_1

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: comp(1..450)

Top 3 Functional Annotations

Value Algorithm Source
Pyrimidine-specific ribonucleoside hydrolase RihB n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CW94_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 91.3
  • Coverage: 150.0
  • Bit_score: 281
  • Evalue 5.60e-73
Pyrimidine-specific ribonucleoside hydrolase RihB {ECO:0000313|EMBL:EYR80598.1}; EC=3.2.2.8 {ECO:0000313|EMBL:EYR80598.1};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 91.3
  • Coverage: 150.0
  • Bit_score: 281
  • Evalue 7.80e-73
inosine-uridine preferring nucleoside hydrolase (EC:3.2.2.1) similarity KEGG
DB: KEGG
  • Identity: 75.3
  • Coverage: 154.0
  • Bit_score: 238
  • Evalue 1.70e-60

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 450
ATGCGCAACCCCACCGACTGGCCGGTGATGATCCACGGCCATGACGGGCTCGGCAATATCGACGTGCCGGAGACGATCGACCTGCCCGTCGATCCGCGCCCGGCGCACCGCTTCATCATCCAGAGCGTCAGGGCCAATCCGGGCGAGGTGACGCTGATCGCCGTCGGCCGCATGTCGAACCTTGCCTATGCGCTGAAAGAAGACCCCGAGATCGCCGGCCTCGTGAAGCAGGTCATCATCATGGGCGGCGCCTTCGACGTGCCCGGCAACATCACCCCCGCCGCCGAAGCCAATATCCACGGCGACCCGGAAGCCGCCGACGTGGTGATGACCGCGTCGTGGAAGGTCGTCGTCGTCGGCCTCGACGTGACGATGAAGACCGTGATGACCCGCAAGCGGCTTGCCGAACTCACCGCGCAGAACGGCCGGCACCTCAAGCTGCTCTCCGAC
PROTEIN sequence
Length: 150
MRNPTDWPVMIHGHDGLGNIDVPETIDLPVDPRPAHRFIIQSVRANPGEVTLIAVGRMSNLAYALKEDPEIAGLVKQVIIMGGAFDVPGNITPAAEANIHGDPEAADVVMTASWKVVVVGLDVTMKTVMTRKRLAELTAQNGRHLKLLSD