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SCNpilot_expt_1000_bf_scaffold_4263_curated_4

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: comp(2880..3752)

Top 3 Functional Annotations

Value Algorithm Source
ABC-type Mn2+/Zn2+ transport system, permease component {ECO:0000313|EMBL:EYR80595.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 90.7
  • Coverage: 290.0
  • Bit_score: 512
  • Evalue 3.10e-142
membrane protein n=1 Tax=Amorphus coralli RepID=UPI0003770B57 similarity UNIREF
DB: UNIREF100
  • Identity: 82.0
  • Coverage: 283.0
  • Bit_score: 463
  • Evalue 2.00e-127
  • rbh
yfeC; Chelated iron transport system membrane protein YfeC similarity KEGG
DB: KEGG
  • Identity: 80.6
  • Coverage: 283.0
  • Bit_score: 462
  • Evalue 1.10e-127
  • rbh

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 873
GTGATCGACGCGCTGCTGGAACCCTTCACCTACGGCTACATGGTCAACGCCATGTGGGTGAGCGCGCTGGTCGGCTGCATCTGCGGCTTCCTCTCCGCCTACCTGATGCTCAAGGGCTGGTCGCTTATCGGCGACGCGCTCTCCCATTCCATCGTGCCGGGTGTCGCCGGCGCCTATATGCTGGGCCTGCCCTTCGCGGCCGGCGCCTTCCTGTCCGGCGGGCTCGCCGCCGCCGCCATGCTCTTCCTCAACCGCCAGACTCAGCTCAAGGAAGACGCGATCATCGGCATGATCTTCTCCTCCTTCTTCGGCCTCGGCCTCTTCATGGTCTCGCTCTCGCCGACGCCGGTGAACATCCAGACCATCGTGCTCGGCAACATCCTTGCCGTGACGCGCGAGGATACGATCCAGCTCGCCATCATCGGTGCCGTCACGCTGGTCGTCCTCATCCTGAAATGGAAGGACCTGATGGTGACGTTCTTCGACGAAAACCATGCCCGCTCCATCGGCCTCAACCCGTCGGGCCTGAAGATTCTGTTCTTCACCCTTCTTAGCGCCTCGACGGTCGCGGCCATGCAGACGGTTGGCGCCTTCCTCGTCGTCGCCATGGTGGTAACACCGGGCGCGACCGCATATCTCCTCACCGACCGCTTCCAGCGCCTCATCGTCATCGCCGCCGCCCTCGGGGCCGGCACGAGCCTTTTCGGCGCCTATCTCTCCTATTTCCTCGACGGCGCGACCGGCGGCATCATCGTGGTGCTGCAGACGGCGATCTTCCTCCTCGCCTTCGTCTTCGCCCCGAAGCACGGCATCATAGCCGCCCGCCGCAGGGGAAGGCGGGCGCTTGAGGCCCCGGAGGCCGGCACGCCATGA
PROTEIN sequence
Length: 291
VIDALLEPFTYGYMVNAMWVSALVGCICGFLSAYLMLKGWSLIGDALSHSIVPGVAGAYMLGLPFAAGAFLSGGLAAAAMLFLNRQTQLKEDAIIGMIFSSFFGLGLFMVSLSPTPVNIQTIVLGNILAVTREDTIQLAIIGAVTLVVLILKWKDLMVTFFDENHARSIGLNPSGLKILFFTLLSASTVAAMQTVGAFLVVAMVVTPGATAYLLTDRFQRLIVIAAALGAGTSLFGAYLSYFLDGATGGIIVVLQTAIFLLAFVFAPKHGIIAARRRGRRALEAPEAGTP*