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SCNpilot_expt_1000_bf_scaffold_4263_curated_8

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: 6526..7395

Top 3 Functional Annotations

Value Algorithm Source
Glycine--tRNA ligase beta subunit n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CMS2_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 88.3
  • Coverage: 290.0
  • Bit_score: 518
  • Evalue 5.20e-144
Glycine--tRNA ligase beta subunit {ECO:0000256|HAMAP-Rule:MF_00255, ECO:0000256|SAAS:SAAS00039777}; EC=6.1.1.14 {ECO:0000256|HAMAP-Rule:MF_00255, ECO:0000256|SAAS:SAAS00039811};; Glycyl-tRNA synthetase beta subunit {ECO:0000256|HAMAP-Rule:MF_00255}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 88.3
  • Coverage: 290.0
  • Bit_score: 518
  • Evalue 7.40e-144
glyS; glycine--tRNA ligase beta subunit GlyS (EC:6.1.1.14) similarity KEGG
DB: KEGG
  • Identity: 86.2
  • Coverage: 290.0
  • Bit_score: 504
  • Evalue 1.90e-140

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 870
ATGCCCGATCTGCTGCTTGAACTCCGCTCCGAGGAAATCCCCGCCCGCATGCAGCGCAAGGCGGCCGGCGACCTGAAAAAGCTCGTCACCGATGCGCTGGTCGAGGCGGGCCTGACCTATGAGGGCGCGCGCGAATACTGGACGCCGCGCCGGCTGACGCTCGACATCCGCGGCCTCAATGCCCGCTCGGCCGACATCCGCGAGGAGCGCAGGGGCCCGCGCACGGATGCGAACGAGAAGGCGATCGAAGGCTTCCTGCGCGGCGCCGGCCTTTCCTCGATTTCCGAAGCGCATGTGCACAGCGATCCGAAGAAGGGCGATTTTTACGTTGCCCATATCGTCAAGCCGGGCCGTCCCGCCGACGAGATCATCGCCGAGGCGATGCCCGGCATCGTGCGCAACTTCCCCTGGCCGAAGTCGATGCGCTGGGGCGCGGCGTCGGCAAGGCCGGGCGCGCTGCGCTGGGTGCGCCCGTTGCAATCGATCCTCTGCACCTTCGGCTCGGAGACCGAGGAGACGCGCGTCGTGCCCTTCGAGGTCGACGGCATCGTCGCGGGCAACGTCACCTACGGCCACCGCTTCCATGCGCCCGAGGCCATCACCGTGCGNNNNNNNNNNNNNNNNNNNNNCAATCTGGAGAAGGCGAAGGTGGTGCTCGACGCCGAGCGCCGCAAGCAGATCATCGCGACGGACGCCAACAACACCGCTTTTGCGAGCGGCCTCGAACTGGTCGAAGACGAGGGCCTGCTGGAGGAGGTCTGCGGCCTCGTCGAATGGCCGCAGGTGCTGATGGGCACGTTCGAGGAGGAGTTCCTGGCGATCCCCTCCGAGATCATCCGCCTGACCATCAAGACCAACCAGAAGTGTTTC
PROTEIN sequence
Length: 290
MPDLLLELRSEEIPARMQRKAAGDLKKLVTDALVEAGLTYEGAREYWTPRRLTLDIRGLNARSADIREERRGPRTDANEKAIEGFLRGAGLSSISEAHVHSDPKKGDFYVAHIVKPGRPADEIIAEAMPGIVRNFPWPKSMRWGAASARPGALRWVRPLQSILCTFGSETEETRVVPFEVDGIVAGNVTYGHRFHAPEAITVXXXXXXXXNLEKAKVVLDAERRKQIIATDANNTAFASGLELVEDEGLLEEVCGLVEWPQVLMGTFEEEFLAIPSEIIRLTIKTNQKCF