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SCNpilot_expt_1000_bf_scaffold_2833_curated_2

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: 258..3308

Top 3 Functional Annotations

Value Algorithm Source
4-aminobutyrate aminotransferase {ECO:0000313|EMBL:EYR78644.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 86.3
  • Coverage: 999.99
  • Bit_score: 1777
  • Evalue 0.0
class III aminotransferase similarity KEGG
DB: KEGG
  • Identity: 80.2
  • Coverage: 999.99
  • Bit_score: 1662
  • Evalue 0.0
  • rbh
Alanine--glyoxylate transaminase n=6 Tax=Rhizobium meliloti RepID=F6BSK0_SINMB similarity UNIREF
DB: UNIREF100
  • Identity: 80.2
  • Coverage: 999.99
  • Bit_score: 1662
  • Evalue 0.0
  • rbh

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 3051
ATGAACGACATGCTGAAGACGACCCCGGACTTTTCCACCGACGCCGCCGCCGCGCTGCTTGCCGAACACTACGGGCTGAAAGGCACGCTCTCGCCGCTTTCCAGCGAGCGCGACCAGAACTTCAAGGTGGAATCGCCGGAGGGCACCTTCATCCTGAAGATCGTCAATGCCGCCGAGCCGGAGGTCGAGAGCGACTTCCAGACGGCGCTTCTCGCCCATGTCGGCACCCATGCCGGCGATCTGCCCATACCGCACATCCGCCCGACGCTCTCCGGTGAAAGCCTCGCCCGCGCCACCAGCCCGGGCGGCGCCGGCCACCGCGTCCGCCTTGTCAGCTGGGTGCACGGGCAGCCCCTTGCCGAGACGCAGCGCAGCGATGCCGCGCTCGTCTCCCTCGGCCGAATGCTCGGCCGGTTCGATGCCGCGCTAAAGGGCTTCATGCATCCGGGCGCGCTGCGCGACCTCGACTGGGACATCCGCAAGGCCGGCCGCTCGGCCGACCGGCTGCACCATGTCACGGCTTCCGAGGACCGCGCGTTGCTGGAACGGTTCCTCGCCCGCTTCTGCGCGATTGAGCCGCGCCTTGCGACCCTGCGCGCCGCCGTCATCCACAACGACGCGAACGACTGGAACGTGCTGGTCGACAACGCCGATCCCGACCGCATTTCCGGCCTCATCGATTTCGGCGATGCGCTCCATGCGCCTGTGGTGGCCGAGGTCGCCATCGCCGCCGCCTATGCCGGCCTCGACCATGCCGATCCGATCGGCGCGGCCGCCGCCATCGTGGCCGGCTATCATGCGGAATATCCGCTCATGAAGGAGGAGGTCGACCTTCTCTACGACCTCATCGCCATCCGCCTCGTCGCCTCGGTGACGATCTCCGCCTCGCGCCGTGCCCATACCGGCGACAATCCCTATCTGGCGATCAGCGAGCGCCCCGCCTGGACGCTGCTGCGCAAGCTCGACCGGATGAATCCGCGCTTCGCCGCCGCCATCCTGCGCAAGGCCTGCGGCTTCGAGGCCGCGCCCGGCGCACGCGCCGTCATGGACTGGATCGCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCGACCTATCCGGCCGTGCTCGTGCCCTATGGCGACCCGGCCCATCCGATGACGGTGATGTCCGCCGCCGGGCAGCCGGACGCGGCGCAGGCGGTCTGGGAAGACCATTGCCGCGAAAACGGCGTCGAACTGGGCATCGGCCCCTGGGGCGAGGAGCGCAGCGTCTATGCCGGGGAGATGTTCGTCTCGCGCTTCATCGAGAAGGCGCGCCGCACCCGCCATCTCGGCCTCGATCTCTTCATGGCCGCCGGCACGAAGGTCTTCACGCCGCTTGCCGCCACCGTCGCCAGCGTCGAGATCGAGAAGGACCCGCTCGGCTACGGCTGCCTGATCGCGCTGCGCCACGAGCCGGAGGGCTGCCCGCCCTTCATCTCGCTCTGGGGCCATCTCGCCCACGAGGCGATGGGCCGCCTGAAAGCCGGCGACCGGCTGGAGGCCGGCGCGCTCGTCGGCGAGATGGGCGCGCCTTCGGAAAACGGCGGCTGGGCGCCGCACCTCCACCTCCAGCTCTCCACCGACACGGCCCTTTCGGCGACCGAAATCCTCGGCGTCGGCGAACCGCGCTATCTCGACGTCTGGGCCGAACTCTTCCCCGACGCGCGCGGCTTCGGCGGCATCGCGCAGGAATTCCAAGCGCGGGAAGGCCGCCCGCACGACGAGATCGTCCGGCTGCGGCGCGAATTGCTGCTGCCGAACCTTTCCATCTCCTACGACAGGCCGATCAAGTTCGTGCGCGGCGAAGGCGTCTGGCTGATCGACGACAGCGGCCGGGCCTATCTCGACTGCTTCAACAATGTCTGCCACATCGGCCATGCCCATCCCGCCGTGGTGGAGGCGATGGCGCGGCAGGCCGCGACGCTCAACACCAACACCCGCTACCTGCACGACAACATCGTCGCCTATGCCGAGCGCCTGACGGGAACGCTGCCGAAGGAGTTGACGGTCGCCGGCTTCGTCAACAGCGGGTCGGAGGCCAACACCCTCGCGCTGCGCCTGATGCGGGCCCATACCGGCCGGGAGAACGCCATCACGCTCGACTGGTCCTATCACGGCACGACGCAGGAGCTGATCGACATCAGCCCCTACAAGTTCCGCCGCAAGGGCGGCCAGGGGCAGAAGCCGCATGTCCATGTCGCCACTGTCCCGGACAGCTACCGTGCCCCGGCGGACTGGCCCGCCGAGGAGCATGGCAGGCGCTTTGCCGAAAGCGTCGCCGAACTGATCGCCGCCATGCAGGCCAGGGGCGAGGCCCCCGGCTTCTTCATCGCCGAATCCATCCCGAGCGTCGCCGGCCAGGTCTTCCTGCCGGACGGCTACCTGAAAGAGGTGTACCGGATGGTGCGCGCGGCGGGCGGACTTTGCATCGCGGACGAGGTGCAGGTCGGCTTCGGCCGCGTCGGCAGCCATTGGTGGGCCTTCGAGACGCAGGGCGTCGTGCCCGACATCGTGACCATGGGCAAGCCGATCGGCGACGGCCATCCGCTCGCCGCAGTGGTGACGACCCGCGAGGTCACCGACAGCTTCGACAACGGCATGGAGTATTTCAACACCTTCGGCGGCAACCCTGTGTCCTGCGCCGTCGGCCTTGCCGTGCTCGACGTCATCGAGGGCGAGGACCTGCGCGGCAATGCACTGGCGATCGGCACCTATCTCATGGACGCCTTCCGCGACATGCAGGAGCGCCACGCGGTGATCAGCGACGTGCGGGGCCTTGGCCTCTTCCTCGGCATCGAACTGGTGAGGGACCGGGCCAGCAAGGCGCCCGCCACCGACTTCGCCCGCGCCGTCGCCAACGGCGCCCGCCGGCGCGGCGTGCTGATGGGCACGGAAGGCCCGCATGACAACGTGCTCAAGCTGCGCCCGCCGATGATCTTCTCCCGGCGCGACGCGGACCACCTGATCGCCGTCCTCCAAGAAACCTTCGCCGATGTGGAAAGGACGCTCGGCCAGGCGGCGGGCTGA
PROTEIN sequence
Length: 1017
MNDMLKTTPDFSTDAAAALLAEHYGLKGTLSPLSSERDQNFKVESPEGTFILKIVNAAEPEVESDFQTALLAHVGTHAGDLPIPHIRPTLSGESLARATSPGGAGHRVRLVSWVHGQPLAETQRSDAALVSLGRMLGRFDAALKGFMHPGALRDLDWDIRKAGRSADRLHHVTASEDRALLERFLARFCAIEPRLATLRAAVIHNDANDWNVLVDNADPDRISGLIDFGDALHAPVVAEVAIAAAYAGLDHADPIGAAAAIVAGYHAEYPLMKEEVDLLYDLIAIRLVASVTISASRRAHTGDNPYLAISERPAWTLLRKLDRMNPRFAAAILRKACGFEAAPGARAVMDWIAXXXXXXXXXXXTYPAVLVPYGDPAHPMTVMSAAGQPDAAQAVWEDHCRENGVELGIGPWGEERSVYAGEMFVSRFIEKARRTRHLGLDLFMAAGTKVFTPLAATVASVEIEKDPLGYGCLIALRHEPEGCPPFISLWGHLAHEAMGRLKAGDRLEAGALVGEMGAPSENGGWAPHLHLQLSTDTALSATEILGVGEPRYLDVWAELFPDARGFGGIAQEFQAREGRPHDEIVRLRRELLLPNLSISYDRPIKFVRGEGVWLIDDSGRAYLDCFNNVCHIGHAHPAVVEAMARQAATLNTNTRYLHDNIVAYAERLTGTLPKELTVAGFVNSGSEANTLALRLMRAHTGRENAITLDWSYHGTTQELIDISPYKFRRKGGQGQKPHVHVATVPDSYRAPADWPAEEHGRRFAESVAELIAAMQARGEAPGFFIAESIPSVAGQVFLPDGYLKEVYRMVRAAGGLCIADEVQVGFGRVGSHWWAFETQGVVPDIVTMGKPIGDGHPLAAVVTTREVTDSFDNGMEYFNTFGGNPVSCAVGLAVLDVIEGEDLRGNALAIGTYLMDAFRDMQERHAVISDVRGLGLFLGIELVRDRASKAPATDFARAVANGARRRGVLMGTEGPHDNVLKLRPPMIFSRRDADHLIAVLQETFADVERTLGQAAG*