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SCNpilot_expt_1000_bf_scaffold_4466_curated_2

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: comp(1222..2193)

Top 3 Functional Annotations

Value Algorithm Source
Methyl-galactoside transporter subunit membrane component of ABC superfamily {ECO:0000313|EMBL:CDX36258.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 85.4
  • Coverage: 323.0
  • Bit_score: 539
  • Evalue 3.40e-150
ATPase n=1 Tax=Burkholderia bryophila RepID=UPI00036B0D1B similarity UNIREF
DB: UNIREF100
  • Identity: 55.0
  • Coverage: 300.0
  • Bit_score: 334
  • Evalue 1.20e-88
  • rbh
Ribose transport system permease protein rbsC, putative (EC:3.6.3.17) similarity KEGG
DB: KEGG
  • Identity: 53.6
  • Coverage: 280.0
  • Bit_score: 284
  • Evalue 4.50e-74

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Taxonomy

Mesorhizobium plurifarium → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 972
ATGGCGCCCCTAGAAGCCACCTTGCCGAAATCCCGCAAGAGCGTCTCGATGGCCGCGATCTTCGAGCGGTTCGGGCTCGCCATCTTCCTCGGCGTGCTGCTCGTCGCCGCCGCGCTGCTGTCGCCGACATTCCTGCGGCCCGCCAACCTCGTCAACGTCCTGACCATCGCCGCGCCGCTCGGCATGGTGGTCGTCGGCCAGGCCTTCGTCATCATGGTGCGCGGGCTGGACCTGTCCGTCGCCTCGCTGATGGCGACCGTCGCCGTGCTCGCCACGGCCTTCAAGGCGACGAGCAACGACGCGATCCCGGTGATCTTCATCGCCGCCATCGTCCTCTCGGCCCTTGTCGGCTTCGTCAATGGCTGGCTGGTCGCGAAACGGAATGTCAGCCCGTTCCTGGCGACGCTGGCGATGATGATCATCCTGCAGGGCGTGCGCTTCGCCTATACCGGCGGCGCGCCGATCAGCACGCTGCCGCCGGGCATGTCGTTCCTGGCGTCCGGCCGCATCTGGGGCATTCCGGTCAACCTGATGACGCTTGCCGTCATGGCGGTGGTGCTGTCCATCGTGCTGCACCGCTCGCGGCTCGGGCGCGAGATCTTCATGGTCGGCAGCAATCCGAAGGCGGCGTTCCTCAACGGCATCGCGCCCGACCGGGTCACCATCGCCTGCTACGTCATCTGTTCCGTCTGCGCGGGCATCGGCGGGCTGTTCCTGCTCGGCTATGTCGGCACCGTGTCCAACTGGGTCGGCCAGGGCTACGAGCTCGATTCCATCGTCGCGGCGGTCATGGGCGGTGTCGCGCTGTCGGGCGGGCGCGGCACCATCCTGGGGGCGCTGCTGGGAGTCGCGGTCCTCGTCGTCATCAACAATCTCGTGCTGCTGCTCGGGTTTCCGATCGAAATGCAGCTCATCATCAAGGGCATCATCATCGTCGGCGCGGCGGCCTTCTATCGCACGCGGCTGGTTTGA
PROTEIN sequence
Length: 324
MAPLEATLPKSRKSVSMAAIFERFGLAIFLGVLLVAAALLSPTFLRPANLVNVLTIAAPLGMVVVGQAFVIMVRGLDLSVASLMATVAVLATAFKATSNDAIPVIFIAAIVLSALVGFVNGWLVAKRNVSPFLATLAMMIILQGVRFAYTGGAPISTLPPGMSFLASGRIWGIPVNLMTLAVMAVVLSIVLHRSRLGREIFMVGSNPKAAFLNGIAPDRVTIACYVICSVCAGIGGLFLLGYVGTVSNWVGQGYELDSIVAAVMGGVALSGGRGTILGALLGVAVLVVINNLVLLLGFPIEMQLIIKGIIIVGAAAFYRTRLV*